Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g02239 ATGTTTATGATGGAACTAGCTGCTAAAGTAAATATGCGTACATTTAGATTTGTGCTGCTGGATGAAATGATAGACAATGGCTTCCCTCTAATTACAGAACCTAATATCCTGCAAGAGATGATTGCTCCACCAAATATTGTTAGCAAAGCCTTGAGTGTTGTGACTGGCAGCAGTTCAAATGTGAGTAATACCCTTCCTGGGGCTACAACATCTTGTGTTCCCTGGAGAACAGCAGAGCCAAAGTACTCCAACAATGAAGCTTATGTAGACCTTGTTGAAGAAATGGATGCAATTATAAACAGGTCCAGGCTCAAAACAGAATTAGATAAAATTGCTGCCTCACAAGCTCGTCTTAGAATTCCAAACCCCATGGTTTTTTATCAAATTGAGCTAGAGTTAGGAATGGTAAAAAATTCTAACCAAGAAAGGTCTATGCCTAAACCCAATGAGGTAAAAAATGAGTCTTCACATGAGTCTTTGTGTGACACAAGTAAAAACTTGAGGCACTCTCTTCTGATTCAGCGTATAATACCAGAGATCCGCAATTACTTTGTTAAAGCTCTTACAAAGGCCAACTCCCATAACAATCGACTTTACTCCTCTCTCTATACTAACGTTTTACTTATTGGAATGACTAAGAGAAACATGCTTGATGAAGCTCTCTTGAGATTGAAGGTTGCAAGGCATTTGTATGATAAGGAAGCTAGAAGGCAATTGGAAGCATTAGGGATAACAAGGAAGCTAGGAGAGGAATTGAATTGCAATGGGAGTGAGTGCTACAAAATGGCTTTCATTATAATTACTGTTGTTACCATGTTTGGGGCACTTGTGTCTCTCATTTTGGTGCAAATGGCTGTGACTCAGAACAAGATTGAACCTGCTACAAATGAAGGATAG 897 0.3913 MFMMELAAKVNMRTFRFVLLDEMIDNGFPLITEPNILQEMIAPPNIVSKALSVVTGSSSNVSNTLPGATTSCVPWRTAEPKYSNNEAYVDLVEEMDAIINRSRLKTELDKIAASQARLRIPNPMVFYQIELELGMVKNSNQERSMPKPNEVKNESSHESLCDTSKNLRHSLLIQRIIPEIRNYFVKALTKANSHNNRLYSSLYTNVLLIGMTKRNMLDEALLRLKVARHLYDKEARRQLEALGITRKLGEELNCNGSECYKMAFIIITVVTMFGALVSLILVQMAVTQNKIEPATNEG. 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g02239 298 MobiDBLite consensus disorder prediction 140 159 - -
Seca11g02239 298 Gene3D Mu homology domain, subdomain B 73 102 - -
Seca11g02239 298 SUPERFAMILY SNARE-like 18 48 IPR011012 -
Seca11g02239 298 Gene3D - 9 49 - -
Seca11g02239 298 PANTHER AP COMPLEX SUBUNIT MU 17 102 - -
Seca11g02239 298 SUPERFAMILY Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor 73 102 IPR036168 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g02239 Seca-Chr11 31455650 31461731 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g02239 217 282 Nodulin-like Gene Family AT2G39210 53.030 6.70e-17 79.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g02239 K12398 - tcc:18600602 147.517