Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g02234 ATGACCCCATTCTTCTACACCCTTCTCACTATTCTTTTCCTTGCCACTGTGAAGTTCCTGTTCCCAACAAGAAGACTCAGAAACCTTCCTCCAGGTCCACCATGCATTCCCCTAATCGGCAACCTCCACCAACTCAAACACCCACTCCACCGCACCCTCCATTACCTATCCCAAAAATACGGCCAAGTCTTCTCTCTCTGGTTCGGCTCCCGTTTCGTGGTCGTCGTTTCATCACCTTCCGTCGTTCACGAATGCTTCACCAAAAACGACATCATCCTAGCAAACCGTCCCCCTCTTCTCGCCGGCAAGCACATCGGCTATAATTACACAACCGTAACGGCCGCCCCTTACGGCGACCACTGGCGCAACCTCCGCCGCATCATTTCACTCGAGGTCCTCTCAACGCACCGTCTCAATTCCTTCTATGAAATTAGAAGAGACGAGATTACGAAGCTAGTTCAGAACCTAGCTCGTGAATCGATCAACGATTTTGCGAAGGTGGAACTGAAATCCAAGTTTTCAGAGATGACGTTTAACACTGTAATGAGAATGATCTCTGGAAAGAGGTACTATGGAGAGGACTGTGATGTGACGGATGTGGAGGAAGCGAGGCAATTCAGGGAGTTAATGAAAGAGCTTATAACATTAGTAGGAGCCAGCAATCCTGCTGAATTTGTTCGTGTTCTTCGGTGGTTTGATTTTGATAATTTGGAGAAGAGGCTAAAGAGGATTAGTAGCAGGAATGATGCGTTTTTACAAGGACTCATTGATGAGCATCGGAATGGGAAACAGAGCGGTAGCAATACCATGATAGATCATCTCTTGAGTCTGCAACAATCACAACCAGAATATTATACGGATCAAATCATCAAAGGGATTATTCTGGTTATGCTCCTTGGAGGCACAGAGACATCAGCGACAACTATAGAATGGGCAATGTCTGCTTTACTAAATCATCCAGAAGTGTTGAAGAAGGTAAGGGATGAATTAGATACTCAAATAGGACAAGATCGTCAAGTAGAAGAGTCAGACATTTCAAAACTTCCTTACCTTCAAAATATTATCTCTGAGACATTTCGGTTATATCCTGCATTCCCATTGTTGTCACCGCATTTTTCTTCAAAAGATTGCACCATTGGAGGATATAATGTCCCACGAGGTACTATTTTGTTGGTTAATGCTTGGGCCATTCATAGAGATCCTCAACTATGGAGCGACCCTACACAATTTAAGCCTGAGAGATTTGAGAAAGAAGGGGAAGCAGATAAGTTGATACCGTTTGGGTTAGGAAGAAGGGCTTGTCCTGGAGCAGGATTCGGGCAGCGTACAGTGAGTTTAACTTTGGGCTTATTGATTCAATGTTTTGAGTGGAGACGGATAAGTGAGGAAGAAATTGATATGACCGAGGGAAAGGGAGGTACCACACCAAAGCTAATTCCTTTAGAGGCCATGTGTAAAGCACGTTCAATTATCATCAACGAGGATTTTCTAAATGCCGGTGAAAACAAGTAA 1512 0.4438 MTPFFYTLLTILFLATVKFLFPTRRLRNLPPGPPCIPLIGNLHQLKHPLHRTLHYLSQKYGQVFSLWFGSRFVVVVSSPSVVHECFTKNDIILANRPPLLAGKHIGYNYTTVTAAPYGDHWRNLRRIISLEVLSTHRLNSFYEIRRDEITKLVQNLARESINDFAKVELKSKFSEMTFNTVMRMISGKRYYGEDCDVTDVEEARQFRELMKELITLVGASNPAEFVRVLRWFDFDNLEKRLKRISSRNDAFLQGLIDEHRNGKQSGSNTMIDHLLSLQQSQPEYYTDQIIKGIILVMLLGGTETSATTIEWAMSALLNHPEVLKKVRDELDTQIGQDRQVEESDISKLPYLQNIISETFRLYPAFPLLSPHFSSKDCTIGGYNVPRGTILLVNAWAIHRDPQLWSDPTQFKPERFEKEGEADKLIPFGLGRRACPGAGFGQRTVSLTLGLLIQCFEWRRISEEEIDMTEGKGGTTPKLIPLEAMCKARSIIINEDFLNAGENK. 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g02234 503 SUPERFAMILY Cytochrome P450 30 488 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g02234 503 Gene3D Cytochrome P450 23 494 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g02234 503 Pfam Cytochrome P450 30 474 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g02234 503 FunFam Cytochrome P450 family protein 21 491 - -
Seca11g02234 503 PRINTS E-class P450 group I signature 57 76 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g02234 503 PRINTS E-class P450 group I signature 393 417 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g02234 503 PRINTS E-class P450 group I signature 424 434 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g02234 503 PRINTS E-class P450 group I signature 434 457 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g02234 503 PRINTS E-class P450 group I signature 176 194 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g02234 503 PRINTS E-class P450 group I signature 289 306 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g02234 503 PRINTS E-class P450 group I signature 352 370 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g02234 503 PRINTS E-class P450 group I signature 81 102 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g02234 503 PRINTS E-class P450 group I signature 309 335 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g02234 503 CDD CYP81 61 481 - -
Seca11g02234 503 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 427 436 IPR017972 GO:0005506|GO:0016705
Seca11g02234 503 PANTHER CYTOCHROME P450 82C3-RELATED 15 488 - -
Seca11g02234 503 PRINTS P450 superfamily signature 353 364 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g02234 503 PRINTS P450 superfamily signature 425 434 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g02234 503 PRINTS P450 superfamily signature 300 317 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g02234 Seca-Chr11 31351284 31354599 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g02234 8 491 Cytochrome P450 AT4G37340 58.776 0.0 593
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g02234 K13260 - gmx:100811727 745.347