Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g02220 ATGGACGAAACACAAGGCCAGCACTACTCTTCCAGCCTACCTGAGCCTACCTTATCTCAAGACAGTAGTGAGAGGTCTTATTTCAATGGGCAGCAAGTGAATCGTGGGACTGGACGGGAGAAGGCTATTGTAGTCAGCCTTGAGCAAATCCGATGTTTAATCACTACTGACGAAGTCATCCTGATGAATTCATTGGATGGTGGTACAGATGATCTACCTTTTGAATTTAGGGCACTGGAGTTGGCTATGGAATTGACATGCATATCTTTGGATGCTCAGGTATGA 285 0.4526 MDETQGQHYSSSLPEPTLSQDSSERSYFNGQQVNRGTGREKAIVVSLEQIRCLITTDEVILMNSLDGGTDDLPFEFRALELAMELTCISLDAQV. 95
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g02220 94 MobiDBLite consensus disorder prediction 1 33 - -
Seca11g02220 94 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 37 94 IPR039204 -
Seca11g02220 94 Gene3D - 16 64 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g02220 Seca-Chr11 31110426 31112069 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g02220 38 94 MRS2 Gene Family AT2G03620 54.545 1.70e-20 82.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g02220 K16075 - nnu:104599247 91.2781