Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g02193 ATGGAAGACAGTGGATGTGAACCACTTGAAATTGATAAGCCCAAGGATATTTTTCTTGGACAAGTTGTTTATAGTATGGATGAAGCCTATAACTTATACCAAGAACATGCTTTCAAAATGGGCTTTAGTGTAAGAAAAGGGAGGCAACTGTATTACGATAATGAGAAGAAGATCACACGGTTTAAGAATAATGAATCCGAAGGTGAAGTGGCTTATGAAAGAGCAGATTCAAGGACAAATTGCAAAGCCATGATGATATTTAATGTGAGCAAGGATGGAGTGTGGAAAATTACAAAATTAGAAATGAATCACAACCACAACTTTGTGCCATCTGAGCAAAGGCATTTGAATTAA 354 0.3616 MEDSGCEPLEIDKPKDIFLGQVVYSMDEAYNLYQEHAFKMGFSVRKGRQLYYDNEKKITRFKNNESEGEVAYERADSRTNCKAMMIFNVSKDGVWKITKLEMNHNHNFVPSEQRHLN. 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g02193 117 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 12 114 - -
Seca11g02193 117 Pfam FAR1 DNA-binding domain 32 110 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g02193 Seca-Chr11 30382989 30383372 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca11g02193 FAR1 2.6e-13 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g02193 - - tpra:123905334 184.496