Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g02189 ATGAAGCAGAAGAAGAGTACTTACATAGTCCATGTGGCCAAATCTGAAATGCCAGAGAGCTTCGAGCACCACACGGCGTGGTACGAATCGTCTCTACAATCCATATCTGACTCAGCCGAAATGCTCTACACCTACGACAACGCGATCCACGGATTCTCCACCAGATTAACAGCGGAAGAAGCTCGTTTGCTGGAGAGCCAAACAGGGATTCTAGCGGTGTTGCCTGAGATGAGGTACGAGCTTCACACAACTAGGACCCCTCTGTTCCTTGGCCTCGACAAGAGCGCAGACATGTTCCCCGAATCAAGCTCAGGGAGCGAGGTTATCGTTGGGGTTCTGGACACTGGTGTTTGGCCTGAAAGCAAGAGCTTCGACGACACTGGATTTGGACCCATCCCTACCAGCTGGAAAGGCGAGTGTGAAACGGGAACCAATTTCACAGCATCAAACTGCAACAAGAAGTTGATTGGGGCAAGAAGTATCGAGTCTAAATCTCCGCGTGATGACGATGGCCACGGCACCCACACGGCGAGCACAGCCGCAGGTTCGGTGGTTTCAGGGGCGAGTCTATTCGGCTACGCTCCGGGGACGGCGCGTGGGATGGCCACGCGCGCCAGAGTAGCTGCATACAAGGTTTGCTGGAAGGGAGGCTGTTTCAGCTCCGACATTTTGGCAGCGATTGACAAAGCCATTGAGGACAGCGTCAATGTCCTTTCTCTATCCCTCGGTGGTGGAATGGCCGATTATTACAGAGACAGTGTTGCCATTGGAGCTTTTGCGGCAATGGAGAAAGGTATACTTGTCTCTTGCTCCGCTGGGAACGCGGGTCCAAGTTCCTACAGTCTCTCCAATGTGGCGCCATGGATAACCACCGTGGGGGCTGGCACACTGGATCGTGACTTCCCGGCGTACGTTAGCCTCGGAAATGGACTTAACTACTCTGGCGTGTCGCTCTATCGAGGAAACGCTTTGCCAGATTCTCCCTTGCCGTTTATATACGCAGGGAATGCCAGCAACACTACGAATGGTAACTTGTGCATGATGGGGACCTTGTCGCCGGAGAAAGTCGCCGGGAAGATCGTGCTGTGTGACCGTGGAATGAGTGCGAGGGTGCAGAAAGCGTTGGGCATGGTGTTGAGTAACACCGCCGCTAACGGTGAAGAACTGGTGGCTGACGCTCATCTTTTGCCGGCGTCGGCGGTGGGTGAAAAAGCCGGGGATGCTATCAAGAAGTACTTGTTTACCGACCCGAAACCAACGGTGAAGATTATGTTCGAGGGAACGAAGGTGGGGATTCAGCCATCACCGGTAGTTGCGGCGTTTAGCTCCCGGGGCCCTAATTCCATCACGCCGCAGATCCTGAAGCCTGATCTAATCGCGCCAGGTGTCAACATCTTAGCGGGGTGGTCAAAGAAAGTGGGTCCCACTGGGTTGTCAGTAGATGAAAGGCGCGTGGATTTTAACATCATATCAGGCACGTCTATGTCCTGCCCTCACGTGAGCGGTCTAGCCGCTTTGATCAAGTCGGCTCACCCGGACTGGAGCCCAGCCGCGATTCGATCGGCTCTCATGACCACGGCTTATACGGCTTACAAGAACGGTGTAAAATTGCAGTCGACGCCGTTCGATCATGGTGCTGGACACGTGGACCCCGTTGCTGCCCTTAATCCTGGACTGGTCTATGATCTGACGGCAGATGATTATCTTGGTTTCCTTTGCGCGCTAAACTACACAGCCTCTGAGATCACGAGCGTGGCTAGGAGAAAATTCCAGTGTGACGCAAGCAAAAAATACAGTGTGACCGACCTTAATTACCCTTCGTTTGCGGTGGTCTATGAATCCGGATCCAATGTAGTTAAACACACGCGGACTCTCACTAACGTGGGACCCGCAGGAACCTACAAAGCTTCTGTGACGTCAGATATTCCATCTGTGAAAATCTCGGTTGAGCCGCAAGTGTTGAGTTTCAAGGAAAATGAGAAAAAATCTTTCACAGTCACGTTTACGTCCTCGGGTTCGACTCCGCAGAGGGTGAGTGGTTTTGGAAGGTTAGAATGGTCTGATGGGAAGCACGTGGTTGGAACCCCGATCTCGATTAGCTGGGAGTGA 2109 0.5306 MKQKKSTYIVHVAKSEMPESFEHHTAWYESSLQSISDSAEMLYTYDNAIHGFSTRLTAEEARLLESQTGILAVLPEMRYELHTTRTPLFLGLDKSADMFPESSSGSEVIVGVLDTGVWPESKSFDDTGFGPIPTSWKGECETGTNFTASNCNKKLIGARSIESKSPRDDDGHGTHTASTAAGSVVSGASLFGYAPGTARGMATRARVAAYKVCWKGGCFSSDILAAIDKAIEDSVNVLSLSLGGGMADYYRDSVAIGAFAAMEKGILVSCSAGNAGPSSYSLSNVAPWITTVGAGTLDRDFPAYVSLGNGLNYSGVSLYRGNALPDSPLPFIYAGNASNTTNGNLCMMGTLSPEKVAGKIVLCDRGMSARVQKALGMVLSNTAANGEELVADAHLLPASAVGEKAGDAIKKYLFTDPKPTVKIMFEGTKVGIQPSPVVAAFSSRGPNSITPQILKPDLIAPGVNILAGWSKKVGPTGLSVDERRVDFNIISGTSMSCPHVSGLAALIKSAHPDWSPAAIRSALMTTAYTAYKNGVKLQSTPFDHGAGHVDPVAALNPGLVYDLTADDYLGFLCALNYTASEITSVARRKFQCDASKKYSVTDLNYPSFAVVYESGSNVVKHTRTLTNVGPAGTYKASVTSDIPSVKISVEPQVLSFKENEKKSFTVTFTSSGSTPQRVSGFGRLEWSDGKHVVGTPISISWE. 703
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g02189 702 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 1 82 IPR037045 -
Seca11g02189 702 Pfam Fibronectin type-III domain 602 699 IPR041469 -
Seca11g02189 702 FunFam subtilisin-like protease SBT1.5 298 430 - -
Seca11g02189 702 SUPERFAMILY Subtilisin-like 81 559 IPR036852 GO:0004252|GO:0006508
Seca11g02189 702 PRINTS Subtilisin serine protease family (S8) signature 491 507 IPR015500 -
Seca11g02189 702 PRINTS Subtilisin serine protease family (S8) signature 105 124 IPR015500 -
Seca11g02189 702 PRINTS Subtilisin serine protease family (S8) signature 168 181 IPR015500 -
Seca11g02189 702 FunFam Subtilisin-like protease SBT1.5 107 309 - -
Seca11g02189 702 FunFam Subtilisin-like protease SBT1.9 1 82 - -
Seca11g02189 702 Gene3D Peptidase S8/S53 domain 108 568 IPR036852 GO:0004252|GO:0006508
Seca11g02189 702 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 8 698 IPR045051 -
Seca11g02189 702 ProSitePatterns Serine proteases, subtilase family, serine active site. 492 502 IPR023828 -
Seca11g02189 702 CDD Peptidases_S8_3 79 528 IPR034197 -
Seca11g02189 702 Gene3D - 572 701 - -
Seca11g02189 702 Pfam Subtilase family 105 532 IPR000209 GO:0006508|GO:0008236
Seca11g02189 702 CDD PA_subtilisin_like 304 423 - -
Seca11g02189 702 Gene3D - 298 431 - -
Seca11g02189 702 ProSiteProfiles Serine proteases, subtilase domain profile. 78 555 - -
Seca11g02189 702 Pfam Peptidase inhibitor I9 7 82 IPR010259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g02189 Seca-Chr11 30312564 30314762 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g02189 5 701 Subtilisin-like Serine Gene Family AT5G67360 72.840 0.0 1072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g02189 - - gmx:100815413 1190.25