Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g02167 ATGGGTCGGCTTAGTCTCATATTTGTTTGGTCACTCTCATTAACACTCTGTTTTAATCCTTATTCTACTTTTGCCCAACTTAGTCCAAACCACTATGCTAACATCTGCCCCAATCTTCAAAGCATCGTTAGAGGTGCAGTTCAAAGGAAGTTCCAACAAACTTTTGTTACAGTTCCTGCCACTCTTCGTCTCTTCTTTCACGATTGCTTTGTCCAGGGTTGTGATGCTTCAGTTATGGTAGCATCCACAGGAAATAACCAAGCAGAGAAGGATCACCCTGACAACTTGTCATTGGCTGGTGATGGATTTGACACAGTGATCAAAGCAAAAGCAGCTGTAGATGCTGTCCCACAATGCAGAAACAAAGTCTCGTGTGCTGATATTCTTGCCCTGGCTACCCGGGATGTTATTGTACTGGCTGGTGGACCATCCTACACGGTTGAATTGGGAAGATTTGATGGGCTAGTCTCTAGAGCTTCTGATGTGAATGGGAACCTCCCTCAGCCAAACTTCAATTTGAACCAGCTGAATGCAATGTTTGCATCGCACGGACTCACCCAAACAGACATGATTGCACTCTCAGGTAAAGCGTGGGCCACGATTTATAATCGTTCTAATTGTCATTTTGCAGGAGCACACACCCTTGGATTCTCCCACTGCAACAGGTTCTCCAATAGAATATTCAACTTTAACAACCAAAGCGCAGTGGACCCGACATTGAACAAGCAATACGCAGCCCAATTGCAACAAATGTGCCCAAGGAATGTGGATCCAAGGATAGCCATCAACATGGACCCAACCACTCCCCGAACATTTGACAATGTGTACTATCAGAACCTTCAGCAAGGAAAGGGGCTTTTCACCTCCGATCAAATCCTCTTTACAGACACAAGATCAAGAGCTACGGTTAATTCCTTTGCTTCTAGCAGCAACGTCTTCAACGCCAACTTCGTTGCTGCTATTACCAAACTGGGTCGCGTTGGGGTCAAGACTGCGAGAAATGGGAAAATTCGTACTGATTGTTCCGTGCTTTAA 1035 0.4522 MGRLSLIFVWSLSLTLCFNPYSTFAQLSPNHYANICPNLQSIVRGAVQRKFQQTFVTVPATLRLFFHDCFVQGCDASVMVASTGNNQAEKDHPDNLSLAGDGFDTVIKAKAAVDAVPQCRNKVSCADILALATRDVIVLAGGPSYTVELGRFDGLVSRASDVNGNLPQPNFNLNQLNAMFASHGLTQTDMIALSGKAWATIYNRSNCHFAGAHTLGFSHCNRFSNRIFNFNNQSAVDPTLNKQYAAQLQQMCPRNVDPRIAINMDPTTPRTFDNVYYQNLQQGKGLFTSDQILFTDTRSRATVNSFASSSNVFNANFVAAITKLGRVGVKTARNGKIRTDCSVL. 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g02167 344 FunFam Peroxidase 167 324 - -
Seca11g02167 344 Pfam Peroxidase 44 309 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca11g02167 344 ProSitePatterns Peroxidases active site signature. 58 69 IPR019794 GO:0004601
Seca11g02167 344 PANTHER - 9 343 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca11g02167 344 FunFam Peroxidase 30 177 - -
Seca11g02167 344 PRINTS Plant peroxidase signature 188 200 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca11g02167 344 PRINTS Plant peroxidase signature 60 80 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca11g02167 344 PRINTS Plant peroxidase signature 141 156 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca11g02167 344 PRINTS Plant peroxidase signature 36 55 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca11g02167 344 PRINTS Plant peroxidase signature 122 132 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca11g02167 344 PRINTS Plant peroxidase signature 319 332 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca11g02167 344 PRINTS Plant peroxidase signature 279 296 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca11g02167 344 PRINTS Plant peroxidase signature 101 114 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca11g02167 344 PRINTS Plant peroxidase signature 263 278 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca11g02167 344 Gene3D Peroxidase, domain 2 167 324 - -
Seca11g02167 344 ProSiteProfiles Plant heme peroxidase family profile. 26 344 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca11g02167 344 SUPERFAMILY Heme-dependent peroxidases 26 343 IPR010255 GO:0004601|GO:0006979|GO:0020037
Seca11g02167 344 Gene3D - 30 343 - -
Seca11g02167 344 PRINTS Haem peroxidase superfamily signature 141 153 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca11g02167 344 PRINTS Haem peroxidase superfamily signature 123 140 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca11g02167 344 PRINTS Haem peroxidase superfamily signature 205 220 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca11g02167 344 PRINTS Haem peroxidase superfamily signature 58 72 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca11g02167 344 PRINTS Haem peroxidase superfamily signature 265 280 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca11g02167 344 CDD secretory_peroxidase 26 343 IPR033905 GO:0004601|GO:0042744
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g02167 Seca-Chr11 29992137 29994993 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g02167 1 341 Peroxidase AT5G67400 66.276 3.91e-167 467
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g02167 K00430 - gmx:100817540 526.939