Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g02158 ATGGGAGACGAGACTAGTGCTGCGGTGGTTGTGACTGTGAGAGAGTTCGACCCAAATAAAGACAGAGAAAGAGTGGAAGCCGTTGAAAGAATATGTGAGGTTGGACCCAGTGGGAAGCTTTCCCTCTTCACCGACCTGCGCGGTGACCCAATTTGCAGGGTCCGCAACTCACCAACTTTCCTCATGCTGGTGGCTGAGATAGGTGAAGAGACAGTGGGAATGATAAGGGGTTGCATCAAAACGGTTACATGCGGAAAGAAGCACTATAGACATGGAAAAAACACCACCACCACAACCTCTAACAACCACTCCATCATTAACAACAACACTGAACCAACAACCGAAACAACCGTTCAAGTCAGTTCCAAACAAGTCCCTGTTTATACCAAACTCGCCTATATACTAGGCCTTCGTGTTTGCCCATTTCACAGGAGAATGGGAATAGGATTGAAACTTGTGCAGAGATTGGAAGAGTGGTTCAGGGAGAATGGAGCTGAGTATTCATACATGGCAACGGAAAAAGATAACGTAGCTTCTGTTAAGCTTTTCACCGAAAAATGCGGGTACTCCAAGTTCCGTACTCCTTCAATACTAGTGAATCCGGTTTTTGCTCACAAAGTTAATACCTCAGCCAAAAAGGTCACAATCATCAAACTCACTCCAAACGACGCCGAATCGCTTTACCGCAACCGATTCGCCACCACCGAGTTTTTCCCTCGCGACATTGACTCTGTTCTTAGCAATAAGCTCACCCTCGGCACCTTCCTCGCCGTACCTCGCGGTTCATACTGTGCCGACACGTGGCCCGGTTCGGACAGGTTTCTGTCGGACCCACCTGCTTCTTGGGCCTTGGTCAGCGTTTGGAACAGTAAGGACGTTTTCACTCTCGAGGTAAAGGGCGCGTCGCGCGTGAGGCGGGCTTTGGCGAAGACTACCCGGGTTCTGGACCGGGCTTTTCCTTGGCTTCGGTTGCCTTCTATTCCGAATTTCTTTGAGCCGTTCGGGTTTCACTTAATGTACGGGCTTGGAGGGGAAGGCCCAGACGCGCTGAGGATGGTGAGGGCTTTGAGTGGGTTCGCGCATAACTTAGCTAAGGAATATGGGTGCGGTGCGGTGGCTACGGAGGTTTCGAGCACTGAACCGCTTAGGTTCGGTGTCCCATACTGGAAGATGCTGTCTTGTGAGGAGGATCTGTGGTGCATGAAGAGGCTCGGAGAAGATTACAGTGATGGCTCGGTTGGTGACTGGACCAAATCTCCACCTGGATTATCCATTTTTGTTGATCCAAGAGAGTTTTAA 1299 0.5012 MGDETSAAVVVTVREFDPNKDRERVEAVERICEVGPSGKLSLFTDLRGDPICRVRNSPTFLMLVAEIGEETVGMIRGCIKTVTCGKKHYRHGKNTTTTTSNNHSIINNNTEPTTETTVQVSSKQVPVYTKLAYILGLRVCPFHRRMGIGLKLVQRLEEWFRENGAEYSYMATEKDNVASVKLFTEKCGYSKFRTPSILVNPVFAHKVNTSAKKVTIIKLTPNDAESLYRNRFATTEFFPRDIDSVLSNKLTLGTFLAVPRGSYCADTWPGSDRFLSDPPASWALVSVWNSKDVFTLEVKGASRVRRALAKTTRVLDRAFPWLRLPSIPNFFEPFGFHLMYGLGGEGPDALRMVRALSGFAHNLAKEYGCGAVATEVSSTEPLRFGVPYWKMLSCEEDLWCMKRLGEDYSDGSVGDWTKSPPGLSIFVDPREF. 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g02158 432 Gene3D - 48 195 - -
Seca11g02158 432 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 11 208 IPR000182 GO:0016747
Seca11g02158 432 CDD NAT_SF 120 167 - -
Seca11g02158 432 Pfam Acetyltransferase (GNAT) family 56 189 IPR000182 GO:0016747
Seca11g02158 432 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 50 192 IPR016181 -
Seca11g02158 432 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 10 432 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g02158 Seca-Chr11 29646840 29648954 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Seca11g02158 Acetyltransf_1 5.5e-16 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g02158 - - gmx:100804109 666.766