Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g02155 ATGAAAGCTTATCATCATTTCAGCTTCTTTTTAATCCTATCATTGTCTCTCTTCACTGCAAAAGGGGTCAACACCACAATTCAATTCAATCAATCCCACACAAGAAGGCTCCTCCACCAGCCCTTGTTTCCGGTGGGTTCCGCTCCGCCGCCGGTAACCCCTCCGCCACCGCCGGCAACCCCTTCATCCCCCGACATTCCTTTCTTCAACGAGTATCCATCAGGGCCGCCGCCACCGGAGCAGAGCCAACCACCGCCTTCAGCCACAATCGCTAACCCGACGGCGACGAAACCCACTAAGCCGACGAAGAATGTGGCAATTGCGGTGTCCGTGGCAATTGCGACGCTGGGAATGTTCTTCGCACTCGCGTTCTTCTTGTACAAACACAGAACTAAGCAGAATTCTGCCACAGGGACACAAAAACTCGTCGGTGGTGGGAATTCTTCTCGGAGGAGAGTTCTAGAAGATTCGCCAAGGGCCCCACCTCCACCTTCAAGCTTCCTCTACATTGGGACGGTGGAGCCCACAAGAACGTCGGTGAGCGAACCAAATCACTCACCTTATCGTAAGCTCAATTCCGTTAAGCTCAGTTCCGATCATCTTTACCGGCCAAGCCCTGAGTTGCAGCCGTTGCCGCCACTCAGCAGGCCCCCCGACGAGATCCGCTCGACGCCGGCGGCGTCAACGTCGTCTTCCTCCGACGAGGAAAGCCGAGAAACGGCGTTTCATTCGCCGCATGGCTCGTCGCTCAGCCACGATGACAGCTATTACACGCCGGTTTCGCGTCACAGTTCTCTGGCTAACGGTAGCCCCGCCGCGCCGGTCGCCGTAGCTCCGGTGGTTCCTTTCTCGAAGAGAACCTCTCCGAAATCTAGGTTTTCTGGTCCGTCGCCGGATGTAAGGCCAGCCATCATTCCCTCTATAAAGAGTTATGCTCTGCCGCCGCAGGCGGCGGCGGACGGCGGTGCCTCCAGAAGGCCGAAATTTTCATCGCCTCCCCCAGCACCGAATTTGAAGAGTCTTCATTCAAACGTGTCCAGAGCTCCACCTCCACCTCCGCCTCCTCCTCCTCCGCCGAGAAAGGATTGGTCTCCGGCGATTAGGGTATCGTCTTCCTCTGTGTCAAGAAATCAGAAACAGCAACAATCTTTGTCTCCAAATGAAGAAGCAGCTTCTGTTAACAGTGTGAGTAAAGGTTCAGAGGAAGGTGATGAAATGGATGGAGGGAAACCCAAGTTGAAGGCTCTGCATTGGGATAAAGTGCGTGCTACCTCAGACCGTGCCACTGTGTGGGACCAGTTAAAATCAAGCTCCTTTCAGTTAAATGAGGACATGATGGAGACCCTGTTTGGCTGCAACTCTGCAAATTCTGCCCCTAAAGAGACAACTGTTACTAGAAAACCAGTTTTCCCTCCAGTTGAACAGGAGAATAGGGTGTTAGATCCCAAGAAATCACAAAACATAGCTATACTACTCAGGGCACTGAATGTGACAAGAGATGAGGTGTCTGAAGCTCTTTTAGATGGGAATCCTGAAGGTTTGGGTGCTGAGCTATTGGAAACTCTGGTAAAGATGGCTCCAACAAAGGAGGAAGAGATAAAACTAAAAAATTATGATGGTGACCTTTCAAAACTTGGGCCTGCAGAAAGATTTCTTAAATCAGTGCTTGATATTCCTTTAGCTTTTAAAAGAGTTGAAGCCATGCTGTATAGAGCTAATTTTGAAGCAGAAGTTAACTACCTCAGGAAATCCTTTCAGACCTTGGAGGCAGCAAGTGAGGAATTGAAGAACAGCAGGCTATTCCTCAAACTCCTTGAAGCTGTTCTCAGGACAGGAAACAGAATGAATGATGGCACCAATCGTGGTGATGCTAAATCATTCAAACTGGAGACACTCCTGAAACTTGTAGATATAAAGGGAACAGATGGAAAGACCACATTGCTCCACTTTGTGGTCCAAGAGATCATTAGATCTGAAGGTATAGGAGGTGATTCTACAAATGAGAATGTTCAAAACCAAACAAATTCTCAATTCAATGAGGATGAATTCAGAAAGAAAGGACTGCAGGTTGTGGCTGGACTGAGTCGAGACCTTGGTAATGTCAAAAAGGCAGCAGGAATGGATTCAGATGTCTTAAGCAGCTACGTCTCAAAGCTTGAAACGGGGCTTGATAAAGTGACATTGGTTTTGCAATATGAAAAACCAGATATGCAAGGAAACTTCTTTAACTCTACAAAGCTATTTCTAAAAGAAGCTGAAGAGAAGATTATTGGGATCAAGGCTGATGAGAGAAGGGCCTTATTCCTTGTGAAAGATGTTACAGAATACTTTCATGGGGATACAGCTAAGGAAGAAGCACACCCTTTCAGAATTTTCATGATTGTAAGAGACTTTCTAAATATTTTGGATCAAGTCTGCAAAGAAGTGGGAAGGATGCAGGATAGAACTGTGATTGGTTCAACCAGATCCTTCAGAATAGCAGCAAGTGCATCCTTACCTGTTCTCAACAGGTACCATGCAAGACAAAATAGAAGTTCAGATGAGGAAAGCTTATCCCCATAG 2562 0.4789 MKAYHHFSFFLILSLSLFTAKGVNTTIQFNQSHTRRLLHQPLFPVGSAPPPVTPPPPPATPSSPDIPFFNEYPSGPPPPEQSQPPPSATIANPTATKPTKPTKNVAIAVSVAIATLGMFFALAFFLYKHRTKQNSATGTQKLVGGGNSSRRRVLEDSPRAPPPPSSFLYIGTVEPTRTSVSEPNHSPYRKLNSVKLSSDHLYRPSPELQPLPPLSRPPDEIRSTPAASTSSSSDEESRETAFHSPHGSSLSHDDSYYTPVSRHSSLANGSPAAPVAVAPVVPFSKRTSPKSRFSGPSPDVRPAIIPSIKSYALPPQAAADGGASRRPKFSSPPPAPNLKSLHSNVSRAPPPPPPPPPPPRKDWSPAIRVSSSSVSRNQKQQQSLSPNEEAASVNSVSKGSEEGDEMDGGKPKLKALHWDKVRATSDRATVWDQLKSSSFQLNEDMMETLFGCNSANSAPKETTVTRKPVFPPVEQENRVLDPKKSQNIAILLRALNVTRDEVSEALLDGNPEGLGAELLETLVKMAPTKEEEIKLKNYDGDLSKLGPAERFLKSVLDIPLAFKRVEAMLYRANFEAEVNYLRKSFQTLEAASEELKNSRLFLKLLEAVLRTGNRMNDGTNRGDAKSFKLETLLKLVDIKGTDGKTTLLHFVVQEIIRSEGIGGDSTNENVQNQTNSQFNEDEFRKKGLQVVAGLSRDLGNVKKAAGMDSDVLSSYVSKLETGLDKVTLVLQYEKPDMQGNFFNSTKLFLKEAEEKIIGIKADERRALFLVKDVTEYFHGDTAKEEAHPFRIFMIVRDFLNILDQVCKEVGRMQDRTVIGSTRSFRIAASASLPVLNRYHARQNRSSDEESLSP. 854
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g02155 853 PANTHER FORMIN-RELATED 8 847 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Seca11g02155 853 MobiDBLite consensus disorder prediction 366 399 - -
Seca11g02155 853 MobiDBLite consensus disorder prediction 44 86 - -
Seca11g02155 853 ProSiteProfiles Formin homology-2 (FH2) domain profile. 403 828 IPR015425 -
Seca11g02155 853 Gene3D Formin, FH2 domain 410 822 IPR042201 -
Seca11g02155 853 MobiDBLite consensus disorder prediction 400 414 - -
Seca11g02155 853 SMART it6_source 403 817 IPR015425 -
Seca11g02155 853 MobiDBLite consensus disorder prediction 243 268 - -
Seca11g02155 853 MobiDBLite consensus disorder prediction 346 363 - -
Seca11g02155 853 Pfam Formin Homology 2 Domain 409 802 IPR015425 -
Seca11g02155 853 MobiDBLite consensus disorder prediction 200 414 - -
Seca11g02155 853 MobiDBLite consensus disorder prediction 41 100 - -
Seca11g02155 853 MobiDBLite consensus disorder prediction 133 170 - -
Seca11g02155 853 SUPERFAMILY Formin homology 2 domain (FH2 domain) 349 814 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g02155 Seca-Chr11 29565149 29569472 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g02155 364 843 FH2 protein (formin) Gene Family AT5G67470 70.782 0.0 649
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g02155 - - gmx:100803578 1101.27