Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g02153 ATGGATGGTTCAGATGTCACCTCTCTCCTTTTCTGTGATGAAGATCCCACCCTTTTGTTGCACAGTGATGAGGATGAAAATATCAACATCACTATTCACTCATTGAATAATCCATGTCCCATTTCTGAGCAGGATGAGAAGGAGCAAATTGGGAATTTGTTTAGGCTTGAAGTAGAGTTAGCATCCTCCAATGGTTGCTTTGTCCATGTGAAGAACACACGTCTCATTGGCATTGACCACATCTTAAAAATTCGGGAAAGACTTGCATTGAAGCTGCACACAGCTTATTTGTCAATTACGTATTTAGATCGGTATCTTTCAAAGCGAGGTGTCCATGAACACAAGTCTTTCCCTATTCATCTGTTATCAGTGGCATGTTTGTCTCTAGCAGCAAAGATGGAAGAGTGTGAACCACCACTTCTATCCCAATATGTAACAGAGGAAGGACTAGGTTTTGTTAACAAACAATCCATTGAGAAGATGGAGTTAGATGTTTTCTGTACCTTGGAATGGAAATTGAGAGTCATCACTCCTTTTGATTACCTGCATTATTTGGTTGGCTTGTTCTGCCCTGAATCTCGACCAGAACCATTAGTCTCAAAAGCTAAGGAACATGTTATGGCTATTGTAAAAGATGTTAATTTGATGGGTACAAGGCCCTCTATTGTTGCCTTGGCTGCCACATTAATGACAACTTTTGATTCTGCATTAACAAGAGAGACCATGGATCATCAGATAGGTGAAATCTCTTCGTGGGGAAATTTACATAATGGACATGTATTTTCCTGTTATCATCTCATGCAGGAAAAGAACAAAGAGAGGGAAAAGTTAAACACTCCTGCCTCAACTTTGACAGCTGAATGGAGCTACACATCTGCTCTTGACATTTCCTCTATCACTTCTTCTACAACTATGAGAAGACTTACTTTTGACAACAAAGAAAATGGTCAGAGGAAAATGCCACATCAGCCTTAG 975 0.399 MDGSDVTSLLFCDEDPTLLLHSDEDENINITIHSLNNPCPISEQDEKEQIGNLFRLEVELASSNGCFVHVKNTRLIGIDHILKIRERLALKLHTAYLSITYLDRYLSKRGVHEHKSFPIHLLSVACLSLAAKMEECEPPLLSQYVTEEGLGFVNKQSIEKMELDVFCTLEWKLRVITPFDYLHYLVGLFCPESRPEPLVSKAKEHVMAIVKDVNLMGTRPSIVALAATLMTTFDSALTRETMDHQIGEISSWGNLHNGHVFSCYHLMQEKNKEREKLNTPASTLTAEWSYTSALDISSITSSTTMRRLTFDNKENGQRKMPHQP. 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g02153 324 Gene3D - 72 174 - -
Seca11g02153 324 Gene3D - 175 251 - -
Seca11g02153 324 SMART cyclin_7 79 167 IPR013763 -
Seca11g02153 324 PANTHER CYCLINS 52 272 IPR039361 -
Seca11g02153 324 CDD CYCLIN_AtCycD-like_rpt2 176 267 - -
Seca11g02153 324 Pfam Cyclin, N-terminal domain 72 174 IPR006671 -
Seca11g02153 324 SUPERFAMILY Cyclin-like 47 173 IPR036915 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g02153 Seca-Chr11 29542252 29543610 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g02153 5 257 Core Cell Cycle Gene Families AT4G37630 31.461 1.78e-31 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g02153 K18811 - gmx:100808000 259.225