Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g02150 ATGGAGAGTTATTTAAATGAGAATTTCGGAGGGGTAAAGTCCAAGAACACTACCGAAGAGGCTCTTGAAAAATGGAGGAAACTATGCGGAGTTGTAAAAAACCCCAAAAGACGCTTTCGTTTCACTGCTAACCTCTCTAAACGCGGCGAAGCAGCTGCTATGCGTCGTACCAATCAGGTCATCATCAATCTCTATATGCTTTTCGCTTCCATCAAGGTTTATGTTATTTCTCTGTGTATTAGGTATGATTACGTTGTACCTGACGATGTTAAAGCAGCAGGTTTTCAAATCTGTGCTGATGAATTGGGGTCTATTGTTGAAGGCCACGATGTAAAGAAGCTCAAGTTTCATGGTGGAGTTAATGGTATTGCAGAAAAGCTTTCCACATCAACCACTAAGGGGCTTAGTGGTGATTCTGATGCCCGGCATAGGAGACAAGAGATTTTTGGAGTCAATAAATTTGCTGAAAGTGAAGTTCGGAGTTTCTGGGTTTTTGTTTATGAAGCCCTTCAAGACATGACTCTCATGATACTTGGTGTGTGTGCAGTTGTGTCTCTGATAGTTGGCGTAGCAACAGAAGGATGGCCCAAAGGGGCTCATGATGGTCTTGGAATTGTTGCAAGTATCCTATTGGTTGTCTTTGTAACAGCAACAAGTGATTATCGCCAATCATTACAATTCAAGGATTTAGACAAGGAGAAGAAAAAGATTTCCATTCAGGTAACAAGAAATGGTTATAGGCAGAAACTGTCAATCTACCATTTACTTCCTGGTGATCTTGTGCATCTTTCCATTGGAGACCAAGTCCCTGCAGATGGGTTATTTGTTTCTGGATTTTCTGTGTTGATTGATGAGTCAAGTTTAACTGGTGAGAGTGAGCCAGTGATGGTAACTTCCCAAAATCCATTTCTTCTCTCTGGAACCAAGGTCCAAGATGGATCATGCACAATGTTGGTTGCAACTGTTGGGATGAGAACTCAATGGGGTAAGTTGATGGCAACTCTAAGTGAAGGTGGAGATGATGAAACCCCATTACAGGTGAAACTGAATGGGGTGGCAACCATTATTGGGAAGATAGGACTGTTCTTTGCAGTGGTTACTTTTGCAGTTTTGGTGAAAGGACTCATGAGCCGGAAACTCCGAGAAGGAAGGTTCTGGTGGTGGTCTGGGGATGATGCGATGGAGATGTTGGAATTCTTTGCTATTGCAGTTACCATTGTTGTTGTTGCTGTTCCAGAGGGGCTACCATTAGCTGTGACATTGAGTCTTGCATTTGCAATGAAGAAAATGATGAATGACAAAGCTCTGGTGAGGCATTTAGCAGCTTGTGAGACTATGGGTTCAGCCACAACTATATGTAGTGACAAGACTGGTACATTAACAACTAACCGCATGACTGTTGTGAAAACATGCATTTGTATGAATAGTAAGGAAGTAACCAATAATGATTCTAGTTTATGCTCTGAACTCCCAGATAAAGCAGTGAAACTTTTGCTGCAGTCAATATTTAATAATACTGGAGGAGAGGTTGTGGTTAACAAAAAAGGCAAATGTGAGATCTTGGGGACACCAACAGAGTCAGCAATATTGGAGTTTGGGTTATCACTAGGTGGGGATTTTCAGGCAGAGAGACAAGCATGCAAACTTATTAAAGTTGAGCCATTCAACTCTGAGAAGAAAAGAATGGGTGTAGTTGTGGAGCTCCCTGAAGGAGGTTTACGAGCCCATTGTAAAGGTGCTTCTGAAATAATTCTGGCTGCTTGTGACAAGGTGATTGACTCAAAAGGTGATGTTGTCTCTCTTGATGAAGAATCAAGTAACCATCTTAATAGCACAATTAACAAGTTTGCTAGTGAGGCACTTAGAACTCTTTGCCTTGCCTATATGGAATTGGAAAACGGGTTCTCTGCTGAAGACTCTATTCCAGCTTCTGGGTACACTTGTATAGGAATTGTTGGTATAAAAGATCCTGTTCGTCCTGGTGTTAAGGAGTCTGTTGCAGTTTGTCGTTCAGCTGGAATAATGGTAAGAATGGTTACAGGAGACAATATTAATACTGCAAAGGCTATAGCCAGGGAATGTGGAATTTTAACAGAGGATGGCATAGCCATTGAAGGTCCAGACTTTAGAGAGAAGACTCAGGAGGAATTGTTTGAACTTATTCCCAAAATTCAGGTTATGGCTCGATCCTCACCTTTAGACAAACATACATTGGTGAAACACCTCCGTACCACGTTTGGGGAAGTTGTAGCTGTAACTGGTGATGGAACAAATGATGCTCCAGCCCTTCATGAAGCAGACATTGGACTTGCAATGGGAATTGCTGGAACTGAGGTTGCTAAAGAAAGTGCAGATGTCATAATTCTGGATGATAATTTCTCCACAATAGTGACAGTGGCCAAATGGGGACGTTCAGTTTACATCAATATTCAGAAATTTGTACAGTTCCAGCTGACTGTAAATGTGGTTGCATTACTAGTAAACTTCTCATCAGCCTGCATGACAGTCTCTTCTTATGATTTTAAGTGTATTCTCTCTTCAGGCAGTGCACCCCTCACAGCTGTTCAACTTTTGTGGGTGAACATGATAATGGACACGTTGGGAGCACTTGCACTTGCAACTGAACCTCCAACTGATGATTTAATGAAACGTGTACCAGTGGGGAGAAAGGGAGAATTCATCAACAATGTCATGTGGAGGAATATCTTAGGACAAGCATTGTACCAGTTTGTGGTGATATGGTTTCTTCAGTCAGTAGGAAAGTGGGTCTTTTTTCTCAGAGGCCCAAATGCTGATATAGTCTTAAACACACTTATCTTCAACTCATTTGTCTTCTGTCAGGTTTTCAATGAGGTAAACTCTCGTGAGATGGAGGAAATAGATGTTTTTAAGGGCATATGGGATAATCATGTGTTTGTGGCTGTCCTCGGTTGCACTGTGGTCTTTCAAATCATAATAGTTGAGTACTTGGGAACCTTTGCAAACACAACACCTCTCAGTCTGGTACAGTGGATCTTTTGCTTGTCGGTTGGATATGTGGGCATGCCAATCGCAACTTACTTAAAGCAGATCCCTGTCTGA 3081 0.418 MESYLNENFGGVKSKNTTEEALEKWRKLCGVVKNPKRRFRFTANLSKRGEAAAMRRTNQVIINLYMLFASIKVYVISLCIRYDYVVPDDVKAAGFQICADELGSIVEGHDVKKLKFHGGVNGIAEKLSTSTTKGLSGDSDARHRRQEIFGVNKFAESEVRSFWVFVYEALQDMTLMILGVCAVVSLIVGVATEGWPKGAHDGLGIVASILLVVFVTATSDYRQSLQFKDLDKEKKKISIQVTRNGYRQKLSIYHLLPGDLVHLSIGDQVPADGLFVSGFSVLIDESSLTGESEPVMVTSQNPFLLSGTKVQDGSCTMLVATVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVLVKGLMSRKLREGRFWWWSGDDAMEMLEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATTICSDKTGTLTTNRMTVVKTCICMNSKEVTNNDSSLCSELPDKAVKLLLQSIFNNTGGEVVVNKKGKCEILGTPTESAILEFGLSLGGDFQAERQACKLIKVEPFNSEKKRMGVVVELPEGGLRAHCKGASEIILAACDKVIDSKGDVVSLDEESSNHLNSTINKFASEALRTLCLAYMELENGFSAEDSIPASGYTCIGIVGIKDPVRPGVKESVAVCRSAGIMVRMVTGDNINTAKAIARECGILTEDGIAIEGPDFREKTQEELFELIPKIQVMARSSPLDKHTLVKHLRTTFGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALLVNFSSACMTVSSYDFKCILSSGSAPLTAVQLLWVNMIMDTLGALALATEPPTDDLMKRVPVGRKGEFINNVMWRNILGQALYQFVVIWFLQSVGKWVFFLRGPNADIVLNTLIFNSFVFCQVFNEVNSREMEEIDVFKGIWDNHVFVAVLGCTVVFQIIIVEYLGTFANTTPLSLVQWIFCLSVGYVGMPIATYLKQIPV. 1027
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g02150 1026 FunFam Calcium-transporting ATPase 646 798 - -
Seca11g02150 1026 Pfam E1-E2 ATPase 237 431 - -
Seca11g02150 1026 Pfam Cation transport ATPase (P-type) 513 591 - -
Seca11g02150 1026 Gene3D - 18 70 - -
Seca11g02150 1026 ProSitePatterns E1-E2 ATPases phosphorylation site. 455 461 IPR018303 -
Seca11g02150 1026 PRINTS P-type cation-transporting ATPase superfamily signature 453 467 - -
Seca11g02150 1026 PRINTS P-type cation-transporting ATPase superfamily signature 753 772 - -
Seca11g02150 1026 PRINTS P-type cation-transporting ATPase superfamily signature 777 789 - -
Seca11g02150 1026 PRINTS P-type cation-transporting ATPase superfamily signature 284 298 - -
Seca11g02150 1026 PRINTS P-type cation-transporting ATPase superfamily signature 650 661 - -
Seca11g02150 1026 PRINTS P-type cation-transporting ATPase superfamily signature 672 682 - -
Seca11g02150 1026 NCBIfam calcium-translocating P-type ATPase, PMCA-type 110 1026 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Seca11g02150 1026 PANTHER CATION TRANSPORTING ATPASE 59 1025 - -
Seca11g02150 1026 PRINTS H+-transporting ATPase (proton pump) signature 785 810 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Seca11g02150 1026 PRINTS H+-transporting ATPase (proton pump) signature 609 627 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Seca11g02150 1026 PRINTS H+-transporting ATPase (proton pump) signature 753 769 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Seca11g02150 1026 CDD P-type_ATPase_Ca_PMCA-like 144 898 - -
Seca11g02150 1026 FunFam Calcium-transporting ATPase 463 657 - -
Seca11g02150 1026 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 459 662 IPR023299 GO:0000166
Seca11g02150 1026 SFLD p-type atpase 435 805 IPR044492 -
Seca11g02150 1026 Gene3D - 463 657 IPR023299 GO:0000166
Seca11g02150 1026 Gene3D - 450 798 IPR023214 -
Seca11g02150 1026 NCBIfam HAD-IC family P-type ATPase 724 839 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Seca11g02150 1026 NCBIfam HAD-IC family P-type ATPase 545 698 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Seca11g02150 1026 NCBIfam HAD-IC family P-type ATPase 388 480 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Seca11g02150 1026 SUPERFAMILY Calcium ATPase, transmembrane domain M 117 1025 IPR023298 -
Seca11g02150 1026 Gene3D - 139 336 - -
Seca11g02150 1026 Pfam Cation transporting ATPase, C-terminus 850 1022 IPR006068 -
Seca11g02150 1026 SFLD C1.7: P-type atpase like 435 805 - -
Seca11g02150 1026 SUPERFAMILY Calcium ATPase, transduction domain A 239 333 IPR008250 -
Seca11g02150 1026 Gene3D - 168 1022 - -
Seca11g02150 1026 SUPERFAMILY HAD-like 451 870 IPR036412 -
Seca11g02150 1026 SMART Cation_ATPase_N_a_2 115 190 IPR004014 -
Seca11g02150 1026 Pfam Cation transporter/ATPase, N-terminus 117 185 IPR004014 -
Seca11g02150 1026 FunFam Calcium-transporting ATPase 770 1026 - -
Seca11g02150 1026 Pfam Ca2+-ATPase N terminal autoinhibitory domain 5 49 IPR024750 GO:0005516
Seca11g02150 1026 FunFam Calcium-transporting ATPase 216 336 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g02150 Seca-Chr11 29494450 29500952 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g02150 1 1026 Primary Pumps ATPases AT4G37640 79.942 0.0 1670
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g02150 K01537 - gmx:100776926 1805.8