Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g02145 ATGGATACCCTGTTTAGGCTAGTCAATTTTCAACCTCATCAACAACCTGATCCATCCCTCAACTCCACCACCACCCTAACAACTTCCAGCAGCTCTAGATCCTCCCAACAAAACTATCATCATTACTACCACCAACAAGAAGACGAAGAATGCTTCAACTTTTACATGGATGAAGAAGACTTATCCTCGTCTTCTTCTAAACACTACTACCCTAATTACCAACCTCACCACCATGTATCCTCCACCACCACCACCACTCTCACTCCTAACACCACTAGCACTCCCACCACCATCACCCCCACCGATTACTCCTTCTCCCCAACCTACCCTGACTTCTTCAACAACCTCGAATTCTCCGGCACGTGGGCGCCCAACCTCCTCATCGAAACCGCACGTGCCATCGCTGACAAGGACAGCAACCGAGTTCAACAACTCATGTGGATGTTAAACGAACTAAGCTCACCGTACGGTGACACCGATCAAAAACTCGCTTCATATTTCCTTCAAGCCTTATTCAGCCGCATGACCGATGCAGGTGATCGAACTTACCGAACCTTATCTTTCGCATCGGAGAAAACTTGCTCCTTTGAATCAACAAGGAAGATGCTGTTGAAGTTCCAAGAGGTTAGCCCTTGGACGACGTTCGGACACGTGGCTTCTAATGGCGCTATCTTAGAAGCCTTAGAAGGTAACCCTAAGCTTCACATAGTTGACATAAGCAACACTTATTGCACTCAGTGGCCTACGCTTTTAGAAGCACTCGCAACTCGCAGTGACGACACGCCTCACCTCCGTTTAACCTCCGTTATAACCGGTGGTGTTTCCGTTCAAAAGGTGATGAAGGAAATAGGGACGAGGATGGAGAAATTCGCGAGGCTTATGGGAGTGCCGTTTAAGTTCAACGTTATCCATCACGCTGGTGATCTCTCTAACTTGAATTTATCTGAGTTGGAGATTAACGATGACGAGGCTTTGGCGGTTAACTGCGTTAACTCGTTGCATTCCGTAACGGCTAACGGAAATAGCCGTGACGCGTTGATTTCGTTGCTTCGGGGATTGCAGCCTAGGGTTTTGACGGTGGTGGAAGAGGAAGCGGATTTTGATTTCGGTCTGGAGTTTGTTAGAGGGTTTGAAGAGTGTGTGAGGTGGTTTAGGGTTTACTTTGAGGCGTTGAATGAGAGCTTTGCGAGGACGAGTAGTGAGAGGTTGATGCTGGAAAGGGCGGCGGGAAGGGCGATCGTGGATTTGGTGGCTTGTGATGCGGCGGAGTCGGTGGAGCGGAGGGAGACGGCGGCGCGGTGGACGAGGCGGATGCATGGAGCGGGATTTGAAACGGTGGCGTTTAGTGAGGAGGTTAGTGATGATGTGAGGGCGCTGTTGAGGAGGTACAGGGAAGGGTGGTCGATGGTACAGTGTTGTGACGCCGGAATATTCTTGACATGGAAGGACCAGCCGGTGGTGTGGGCCAGTGCATGGAGGCCTTGA 1485 0.5024 MDTLFRLVNFQPHQQPDPSLNSTTTLTTSSSSRSSQQNYHHYYHQQEDEECFNFYMDEEDLSSSSSKHYYPNYQPHHHVSSTTTTTLTPNTTSTPTTITPTDYSFSPTYPDFFNNLEFSGTWAPNLLIETARAIADKDSNRVQQLMWMLNELSSPYGDTDQKLASYFLQALFSRMTDAGDRTYRTLSFASEKTCSFESTRKMLLKFQEVSPWTTFGHVASNGAILEALEGNPKLHIVDISNTYCTQWPTLLEALATRSDDTPHLRLTSVITGGVSVQKVMKEIGTRMEKFARLMGVPFKFNVIHHAGDLSNLNLSELEINDDEALAVNCVNSLHSVTANGNSRDALISLLRGLQPRVLTVVEEEADFDFGLEFVRGFEECVRWFRVYFEALNESFARTSSERLMLERAAGRAIVDLVACDAAESVERRETAARWTRRMHGAGFETVAFSEEVSDDVRALLRRYREGWSMVQCCDAGIFLTWKDQPVVWASAWRP. 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g02145 494 MobiDBLite consensus disorder prediction 78 99 - -
Seca11g02145 494 MobiDBLite consensus disorder prediction 11 39 - -
Seca11g02145 494 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 99 486 IPR005202 -
Seca11g02145 494 Pfam GRAS domain family 125 493 IPR005202 -
Seca11g02145 494 ProSiteProfiles GRAS family profile. 114 493 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g02145 Seca-Chr11 29403351 29404835 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g02145 1 494 GRAS Transcription Factor Family AT4G37650 59.023 0.0 585
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Seca11g02145 GRAS 7.9e-108 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g02145 - - gmx:100778524 701.049