Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g02119 ATGCTCTCTGCTCTCCCTCCCTCTGACCCTCTCTTCGGAAACCCATTCTCAGCCTTCGCTGGCAGTTTCACGCCGTGGGATTGCCATGACCTTTTTTCCGGCATCCTCGAACCCACCAACGACCCCAAACCGGTTACCTCGAGTTCCGGTTCTGATGGACCGAACCAAACCCATGAGAAGCCTAAACCGGACCCTGACGAACCGAACCGGGATGTGTCTGTTTTGGACGAGCGAAAGCGGCGACGCATGATATCGAACCGGGAATCGGCCCGGAGGTCGAGGATGCGTAAACAGAGGCACCTAGAGAACCTACGGAACCAGTTGAACAAGTGTAGGATCGAAAACAGGGAACTAAACAACCGATTGCAGTTCATCTTGCATCACTGTGACCGCATACGAACCGAAAACGAATGGCTCCGGTCCGAGCGAACCTTTCTCCGCCAAAAATTGTCCAATTTCACTCAAATTTTGGTTTTGCAACAATTGCAACAACAACCTTTCTCATCATCCCCTGCATGGACATGCAACACCATGGTCATGACAGAATAA 549 0.5155 MLSALPPSDPLFGNPFSAFAGSFTPWDCHDLFSGILEPTNDPKPVTSSSGSDGPNQTHEKPKPDPDEPNRDVSVLDERKRRRMISNRESARRSRMRKQRHLENLRNQLNKCRIENRELNNRLQFILHHCDRIRTENEWLRSERTFLRQKLSNFTQILVLQQLQQQPFSSSPAWTCNTMVMTE. 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g02119 182 MobiDBLite consensus disorder prediction 34 100 - -
Seca11g02119 182 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 81 96 IPR004827 GO:0003700|GO:0006355
Seca11g02119 182 Gene3D - 76 130 - -
Seca11g02119 182 CDD bZIP_plant_GBF1 79 130 IPR045314 GO:0003700|GO:0006355
Seca11g02119 182 Coils Coil 87 121 - -
Seca11g02119 182 SUPERFAMILY Leucine zipper domain 78 128 IPR046347 GO:0003700|GO:0006355
Seca11g02119 182 Pfam bZIP transcription factor 78 136 IPR004827 GO:0003700|GO:0006355
Seca11g02119 182 FunFam BZIP transcription factor 76 127 - -
Seca11g02119 182 PANTHER BZIP TRANSCRIPTION FACTOR 44 42 160 - -
Seca11g02119 182 MobiDBLite consensus disorder prediction 57 91 - -
Seca11g02119 182 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 76 139 IPR004827 GO:0003700|GO:0006355
Seca11g02119 182 MobiDBLite consensus disorder prediction 40 56 - -
Seca11g02119 182 SMART brlzneu 74 138 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g02119 Seca-Chr11 28834775 28835323 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g02119 1 161 bZIP Transcription Factor Family AT3G49760 41.212 4.18e-34 116
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Seca11g02119 bZIP_1 4.9e-07 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g02119 - - ahf:112800711 219.935