Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g02051 ATGGCTTTTGCTAACACAAGCACTGACTCAACTAATGCAAAGTATCAGCATGTAAACGTTTTAGTGACATCTGGATCGTTGATACCCTCTCTTGTAAAATGCATGCTCTTTCATCTGGACAGCTTAATAACACATGGAAATGTTTATAGCTCTTGGGAAGTGGGAAAACCTCAATGTTTCCAGTGGATCAAGGAGCGTTTCAACCATCCCAACGTTCGCTTTTGTGTAATTGGAGATGGATGGGAAGAGTGTAAAGCTGCAGAAAGCATGAGATGGCCATTTGTTAAGATTGAATCAGGTCCGGGAAAACCTCACAGGTTCCCTGGTCTCACACTGAGAACAATTAGCCACTATTTTTCTGTGGTGTATGGAAGACCGGCCAATGAGAACGATGAGGAATGA 402 0.4279 MAFANTSTDSTNAKYQHVNVLVTSGSLIPSLVKCMLFHLDSLITHGNVYSSWEVGKPQCFQWIKERFNHPNVRFCVIGDGWEECKAAESMRWPFVKIESGPGKPHRFPGLTLRTISHYFSVVYGRPANENDEE. 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g02051 133 Gene3D - 1 103 IPR038102 -
Seca11g02051 133 PANTHER EYES ABSENT 9 119 IPR028472 GO:0004725
Seca11g02051 133 SUPERFAMILY HAD-like 18 109 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g02051 Seca-Chr11 26670734 26673352 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g02051 7 133 Protein tyrosine phosphatase (PTP) family AT2G35320 60.000 3.59e-56 175
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g02051 - - gmx:100791661 245.358