Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g02044 ATGGGAAGTGGACTTTCCAGCTTGTGTTCATGCTTCGAACCGGTGAACCGGACCAACCGACCGGACCAACAGGAAGTGATTTTCACAGCCACCGAACCATTGGACGAAACCCTAGGTCACTCCTTCTGCTACGTCAGATCCTCCAATCGCTTCCTCTCTCCCACTCACTCCGATCGATTCCTCTCTCCCTCAACTTCCCTTCGCTTCTCACCAAACCACGACCGAATCCGACCCGAATTTCACGAAACCGGGTTCAAAGCCATTTCCGGAGCCTCCGTCAGCGCTAACAGCTCCGTCCCCAAAACGGTTATACAGTTAGACGAAGATAGCGGCATCGATTGCGCTGGAGGAGCTGCCACTAAGGGTAATATCGTCAATGGGTTTGAAAGTACGTCGTCGTTTAGCGCTCTCCCGCTTCAGCCCGTGCCGCGTGGTGGGGAACTCTTTGAAGGGGGTGGGTTCTTTCTCTCTGGCCCAATTGAGAGTGGTGCACACTCTGGACCAATTAGCGCGGGTGTCGGCGGTGACGGTGGTGTCGCCGGCGGCGGCGGAGAGGTTCCTTTCTCGGCGCCGCTTGGGGGGATGTACGCGAGGAAGAAGAAGGGTGTTTCGGGGTTTAGGAAGGCTTTCAACCGGAAGGTGTCGGAGAAGAAGCGGCCGTGGGTTGTGCCGGTGTTGAACTTCGTTGGGAGGAAGGAGGTTCAAGTTCCGACGAGTGAAGGGAGGCCGCCGGTGGTGCCGGAGGTGAAGAGCGAGAACAATGTGCAGTGGGCGCTGGGGAAGGCAGGGGAGGATCGGGTTCATGTGGTGGTGTCAGAGGAGCAAGGGTGGTTGTTCGTCGGGATTTATGACGGTTTCAACGGCCCCGACGCGCCGGAGTTTCTGATGGGTCATCTTTACCGCACTGTTCACAACGAGCTTCAGGGTTTGTTTTGGGAAGTTGAAGAAGAAGGAGAAGAAGCTCACGAGAGTAGTAACCCTGCAGGCACAGACCAGAGCGTTGGGCTGAAAAACAAAGAGGGAGAAGATGGTTCGGCGAAGATGGTACAGGGAACTGGAACTGGAACTGGAACGGAGAGTAAACGGCGTAGGCTATGGGAACTTCTCGCTGAAGACCCTGAAGATGGGCTTGATCTTTCTGGGTCTGACAGGTTTGCGTTTTCTGTTGATGATGCACTTAGCGTTAGCAATGCCAATGCTGGCTCCGCAGTTAGTAGACGGTGGCTGTTGCTGTCGAAATTGAAGCATGGATTATCAAAGCATAAAGAGGGTCATGGTCATGGTCATGGTCAAGGTCATGGTCATGGTAATGGTAATGGTAATGGTAGGAAGTTGTTGCCTTGGAATTTGGGGACGGAGGAGAAAGAGAAGGTAGAGGTGGAGAACAGGGCTGAAGATAAGCCTAGTGGTGGTGGTGGTGCGGGTGGGAGGAGGAGGAAAGTGGGTCCTGTGGATCATGATCTGGTTTTGAGTGCACTGTCTCGGGCTCTAGAAGTGACTGAGCTTGCATATTTGGCTATGACGGATAAGCTTCTGGATACAAATCCTGAACTTGCTTTGATGGGTTCGTGTCTGTTAGTTGCTTTGATGAGGGATGAGGATGTGTATGTGATGAATGTTGGGGATAGCCGTGCTATTGTTGCACACTATGAGACCAAGGAGGTTAGTTCTAATGTGGAACCGGGAAGCAAGGGAGATACTGGTTCCAGCACCGAGAGCATAGTTGAGACTGAGAGTGCAATCGAGTTGGGGAATCAGGGTCCTGCTCAAGACATGAGGTTGGTTGCTTTGCAGCTGTCTACTGACCACAGCACCAGCATTGAAGAAGAAATCATTAGAATTAAGAATGAGCATCCTGATGATACCCAATGTATAGTCAATGATAGAGTCAAGGGTCGTCTTAAGGTCACCAGAGCATTTGGGGCCGGATTTTTGAAACAGCCAAAGTGGAACGATGCAGTACTAGAAATGTTTCGTAATGAATATATTGGCACTGCTCCATATATATCCTGTTGTCCTTCACTACGTCACCATAGATTATGCCCGAGAGATCAGTTCCTGATCCTCTCATCTGATGGTTTATATCAATATTTAACCAATGAAGAAGTGGTTTCTCAAGTTGCAAGCTTCATGGAAAAGTTTCCAGAAGGAGATCCTGCTCAACATTTAATAGAAGAACTGCTCCTCCGTGCAGCCAAGAAGGCTGGAATGGATTTTCATGAGTTGCTGGATATCCCACAAGGAGATCGGAGGAAGTATCATGATGATGTTACTGTTATGGTGATATCACTTGAAGGAAGAATCTGGAAATCCTCAGGAAAATATCTGTGA 2331 0.5041 MGSGLSSLCSCFEPVNRTNRPDQQEVIFTATEPLDETLGHSFCYVRSSNRFLSPTHSDRFLSPSTSLRFSPNHDRIRPEFHETGFKAISGASVSANSSVPKTVIQLDEDSGIDCAGGAATKGNIVNGFESTSSFSALPLQPVPRGGELFEGGGFFLSGPIESGAHSGPISAGVGGDGGVAGGGGEVPFSAPLGGMYARKKKGVSGFRKAFNRKVSEKKRPWVVPVLNFVGRKEVQVPTSEGRPPVVPEVKSENNVQWALGKAGEDRVHVVVSEEQGWLFVGIYDGFNGPDAPEFLMGHLYRTVHNELQGLFWEVEEEGEEAHESSNPAGTDQSVGLKNKEGEDGSAKMVQGTGTGTGTESKRRRLWELLAEDPEDGLDLSGSDRFAFSVDDALSVSNANAGSAVSRRWLLLSKLKHGLSKHKEGHGHGHGQGHGHGNGNGNGRKLLPWNLGTEEKEKVEVENRAEDKPSGGGGAGGRRRKVGPVDHDLVLSALSRALEVTELAYLAMTDKLLDTNPELALMGSCLLVALMRDEDVYVMNVGDSRAIVAHYETKEVSSNVEPGSKGDTGSSTESIVETESAIELGNQGPAQDMRLVALQLSTDHSTSIEEEIIRIKNEHPDDTQCIVNDRVKGRLKVTRAFGAGFLKQPKWNDAVLEMFRNEYIGTAPYISCCPSLRHHRLCPRDQFLILSSDGLYQYLTNEEVVSQVASFMEKFPEGDPAQHLIEELLLRAAKKAGMDFHELLDIPQGDRRKYHDDVTVMVISLEGRIWKSSGKYL. 777
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g02044 776 Pfam Protein phosphatase 2C 597 732 IPR001932 -
Seca11g02044 776 CDD PP2Cc 485 764 IPR001932 -
Seca11g02044 776 ProSiteProfiles PPM-type phosphatase domain profile. 249 764 IPR001932 -
Seca11g02044 776 PANTHER PROTEIN PHOSPHATASE 2C 250 763 IPR015655 GO:0004722|GO:0006470
Seca11g02044 776 MobiDBLite consensus disorder prediction 419 481 - -
Seca11g02044 776 Gene3D - 230 408 IPR036457 -
Seca11g02044 776 SMART PP2C_4 246 762 IPR001932 -
Seca11g02044 776 MobiDBLite consensus disorder prediction 449 466 - -
Seca11g02044 776 Gene3D - 435 771 IPR036457 -
Seca11g02044 776 SUPERFAMILY PP2C-like 261 765 IPR036457 -
Seca11g02044 776 MobiDBLite consensus disorder prediction 315 360 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g02044 Seca-Chr11 26496057 26501681 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g02044 1 776 PP2C-type Phosphatase Gene Family AT2G35350 55.918 0.0 808
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g02044 - - mtr:11415473 1068.14