Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g02026 ATGGCTTTCTCTGATCTTTTGTGTCTTCTTCTCCTTGCCACCTTTCTTTTCATGCAAACTCTGGCAGATACTTCATGCACTGATTGTTTTGTTCAATCTCGTGCATCATATTACCCAAATTCTACAGAAAATGGCACAGACGTTGGTGCATGTGGATTTGGTTCCTTTGGTGCTACCGTTAATGGTGGGGATGTATCAGCTGCATCTAATCTTTATCGAAATGGGGTTGGCTGTGGCGCCTGTTACCAGGTTAGGTGTACCAACAGTGGTTATTGCTCAGACAATGGTGTCACTGTAGTTTTAACTGACCAAGGCTCAGGTGATAACACTGACTTCATTCTTAGCCAACGAGCCTTTGGTGGGATGGCTCAGAACTCTGATGCAGCTGCTTCTCTTTTAGCTCTTGGTGTTGTTGGTATTGAATACAGACGCGTTTCATGCAGCTATCCAAACAAAAACATTACAATTAAGATAGATGAGAGTAGCAGCAACCCTCATTTCTTGGCTTTTGTCATATGGTTTCAACAAGGAAGGAGCGACATAACTGCTGTGCAGCTCTGCGAGGTACTTTCTGCTTCCTTGTCCTGTGATAAGTTGTCATTTTGTCAAATCTATGAGCTGAATAAACTCAAATTTTGA 639 0.4257 MAFSDLLCLLLLATFLFMQTLADTSCTDCFVQSRASYYPNSTENGTDVGACGFGSFGATVNGGDVSAASNLYRNGVGCGACYQVRCTNSGYCSDNGVTVVLTDQGSGDNTDFILSQRAFGGMAQNSDAAASLLALGVVGIEYRRVSCSYPNKNITIKIDESSSNPHFLAFVIWFQQGRSDITAVQLCEVLSASLSCDKLSFCQIYELNKLKF. 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g02026 212 CDD DPBB_EXLB_N 31 147 - -
Seca11g02026 212 Gene3D - 148 211 IPR036749 -
Seca11g02026 212 Gene3D - 18 147 IPR036908 -
Seca11g02026 212 PANTHER EXPANSIN-B3 12 189 - -
Seca11g02026 212 Pfam Lytic transglycolase 68 134 IPR009009 -
Seca11g02026 212 SUPERFAMILY Barwin-like endoglucanases 17 151 IPR036908 -
Seca11g02026 212 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 48 152 IPR007112 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g02026 Seca-Chr11 26068979 26070472 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g02026 1 188 Expansin Gene Family AT4G17030 43.915 2.18e-49 159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g02026 - - gmx:100794009 312.383