Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g01983 ATGGAGTTTGAATCAGAGGTTGTGGCCTATGAATTTTACAATGAGTACAGTAGGAGAGTTGGGTTTGGTATTCGTCGAGAATATGGAAATAAAAGCAAAAAAGATGGAATTTTGACTCCCAGAAGATTCTCATGCTTCAAGGAGGGTAAACGAGGCGTTGACAAACGTGACCACTTGACAAAAGAGGCTAGAGAAGAAACCAGAACAGGATGTGAAGCACGTATGGTTATTTCACTTGATCAGAAGATAGGGAAATACAAGCATAATATTTTAATTACCTTCACTGCAAGTATGAGATCAACTCAATTAAGTGAGAGCTTTAATGCTGATCTGAAAAACCACTTGAAGTCAGATTTAAATTTGGTACAATTTTTCACACACTTTGAAAGAGTTGTAAATGGAAAAAGGAACAATGAGTCAGAAGCCGAATATGAGTCAATACATAAGCTTCCTAGATTGAAAATGAAGAAGGCCCTTATGCTTGTGCAAGCTAGAGACATTTACACTCCAAAGCTTTTTGAGGAGTTCCAAGAGGAATATGAGGAATTTCAAGGCACTTGCATAAAGGAATTGAAAGATAGAGCATCTGAATCTCATGAAACATACACCTTTTTGTCCAAAGTTTGTGAAGAGTCCAACAAAATAATTAATGTTATGTTGGTTGCAACATTTATGGGTGGAGAATCAATGGGAAAGTGTGATGTATCCATATTAATTGCAAATGAGAAAATTGACAACAATGTGAACAACATTGAATTTGGTGGGGAGAAAGGCATAAAGAAGCGAGATTCCTCACATAAGGGTAAAAAACGACCTAAATCTTGGGTTGAGAAGTTGGCTCGAAAAAGAAAGGCAAACCTAGCACAAAAAAAGAGAAAGACTCAAGAAAATTTGGTAATTTATTGCTTTCATTCTTTTTTTTTTTCAATGAGTTATCAATTTCCTTATTATACATATTACTTATACTATAAACTATATAGGAACAATCTGTAG 993 0.3505 MEFESEVVAYEFYNEYSRRVGFGIRREYGNKSKKDGILTPRRFSCFKEGKRGVDKRDHLTKEAREETRTGCEARMVISLDQKIGKYKHNILITFTASMRSTQLSESFNADLKNHLKSDLNLVQFFTHFERVVNGKRNNESEAEYESIHKLPRLKMKKALMLVQARDIYTPKLFEEFQEEYEEFQGTCIKELKDRASESHETYTFLSKVCEESNKIINVMLVATFMGGESMGKCDVSILIANEKIDNNVNNIEFGGEKGIKKRDSSHKGKKRPKSWVEKLARKRKANLAQKKRKTQENLVIYCFHSFFFSMSYQFPYYTYYLYYKLYRNNL. 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g01983 330 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 93 211 IPR031052 GO:0006355
Seca11g01983 330 Pfam FAR1 DNA-binding domain 11 87 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g01983 Seca-Chr11 25136967 25139249 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca11g01983 FAR1 1.6e-16 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g01983 - - mtr:112416545 171.4