Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g01970 ATGTATGGGAAATGTGAAATGTTGGATGCTACAAAGCGAGTATTTGATGCATATGTGGTTTTTGAAATTAAGAACCATGTTGTGAAGATCTCTCAGCTTGGTGTTGTGAAGGATATCCGTGGAAGCCAACTTGCTGCAGTTGTGGGAAGCCAAGCCATCATCACAGGAACTTTTTCAATCATCAAGCAATGTTTTGTATTGAGTTGTTTCTCAAGAGTCAAAGTTGTTCATACTTCATCCAAAATCCATGGTCAAGTATATATTCCTGAGATCAATTGGCTGCTAATGCTCTTATGTTTGACTGTACCTACTGGCTGTAACTATCAGTATGCTATTCGGGTTTTTGATGTATTAGTGTTTGTTGAGTTCCTCTCTTTGTTTCAAGTTGGCATTGGTTGA 399 0.3835 MYGKCEMLDATKRVFDAYVVFEIKNHVVKISQLGVVKDIRGSQLAAVVGSQAIITGTFSIIKQCFVLSCFSRVKVVHTSSKIHGQVYIPEINWLLMLLCLTVPTGCNYQYAIRVFDVLVFVEFLSLFQVGIG. 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g01970 132 Pfam K+ potassium transporter 42 102 IPR003855 GO:0015079|GO:0016020|GO:0071805
Seca11g01970 132 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 43 107 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g01970 Seca-Chr11 24942229 24942726 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g01970 44 105 Inorganic Solute Cotransporters AT1G70300 80.645 1.36e-28 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g01970 K03549 - gmx:100784861 110.538