Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Seca11g01969 | ATGGAACTTAGTTTTAAGCACCAATTTGGCCTTATTTGTGTCATACTGCTGTTTCCTGCACTTTGTAACTGCAAGGAATATTATACTAAATCTAGAGCAAGCTATTATGGCAGCCCTGATGGCTATTGGAATCCAAACTACGGTGAGGGAGATAGAACAGACTTCATCTTGAGTCCGCAAGCCTTCTCAAGATTGGGATATGCAAATCTGAGCAAATATGGTGTGGTGGATATTGAATACAAAAGGGTCCCCTGTACGTTTAGGGGCTATGACATCGTGTTTCAAGTCCATGAAAGCAGCAGAAACCCAGACTACTTTGCTATTGTGGTTCTCTATGTAGGTGGAACATATGAAGTCACTGGTGTTGAGATGTGGCAGAGAGATCACCACCAATGGGAGCCTCTGCGTAGGACTTATGGGGCAGTGTTTGACTTTGCTAATCCATCGAGAGATGAAATCCGCTTAAGCGTCACCGTCGAGCGACCAAGCAACCGTCTCCGTCCAGTTTCCAGTGCACCGTCCGCGTCGTACTCCATCTTCTCCGGCAATCGACGGCGTGCCCTGCCTCTACGTGAACCTGAGCAACCAAGTGATGCTGGAAGTGAACCTGAATCACCATTAAATGCTAGAGGATCATATGGTGGAAGCAACTTGAATAGCCAAAATAATATCTAG | 675 | 0.4607 | MELSFKHQFGLICVILLFPALCNCKEYYTKSRASYYGSPDGYWNPNYGEGDRTDFILSPQAFSRLGYANLSKYGVVDIEYKRVPCTFRGYDIVFQVHESSRNPDYFAIVVLYVGGTYEVTGVEMWQRDHHQWEPLRRTYGAVFDFANPSRDEIRLSVTVERPSNRLRPVSSAPSASYSIFSGNRRRALPLREPEQPSDAGSEPESPLNARGSYGGSNLNSQNNI. | 225 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Seca11g01969 | 224 | ProSiteProfiles | Expansin, Cellulose-binding-like domain profile. | 104 | 159 | IPR007117 | - | |
Seca11g01969 | 224 | SUPERFAMILY | Barwin-like endoglucanases | 39 | 111 | IPR036908 | - | |
Seca11g01969 | 224 | PANTHER | EXPANSIN-B3 | 50 | 159 | - | - | |
Seca11g01969 | 224 | Pfam | Expansin C-terminal domain | 92 | 160 | IPR007117 | - | |
Seca11g01969 | 224 | SUPERFAMILY | PHL pollen allergen | 92 | 167 | IPR036749 | - | |
Seca11g01969 | 224 | MobiDBLite | consensus disorder prediction | 210 | 224 | - | - | |
Seca11g01969 | 224 | ProSiteProfiles | Expansin, family-45 endoglucanase-like domain profile. | 9 | 90 | IPR007112 | - | |
Seca11g01969 | 224 | MobiDBLite | consensus disorder prediction | 183 | 224 | - | - | |
Seca11g01969 | 224 | Gene3D | - | 84 | 177 | IPR036749 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Seca11g01969 | Seca-Chr11 | 24935658 | 24940580 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Seca11g01969 | 14 | 159 | Expansin Gene Family | AT4G17030 | 37.379 | 5.60e-37 | 128 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Seca11g01969 | - | - | psat:127074244 | 204.527 |