Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g01913 ATGTCAAAAATCCTCCTCCAAAACTCTCCAGAGTTCGTCTTCTCCTTCATGGCTGCCTTCATGCTCAGCTTCGTGGCCACCACCGCCAATCCATTCTATACTACCGCTGAAATCACAGAACAACTCACCACTTCTAAAGCCAAGCTTGTCATACTCGGTCCACGTATGTCTCCCAAAACATGGGGAAATTTAAAGGCGATGATTACCGTCGACGAAAGCGCCGGATAA 228 0.4781 MSKILLQNSPEFVFSFMAAFMLSFVATTANPFYTTAEITEQLTTSKAKLVILGPRMSPKTWGNLKAMITVDESAG. 76
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g01913 75 Pfam AMP-binding enzyme 4 57 IPR000873 -
Seca11g01913 75 SUPERFAMILY Acetyl-CoA synthetase-like 4 72 - -
Seca11g01913 75 Gene3D - 4 60 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g01913 Seca-Chr11 23418071 23418298 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g01913 4 72 Monolignol Biosynthesis Gene Families AT1G65060 53.521 1.13e-15 67.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g01913 K01904 - gmx:100790396 74.3294