Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g01876 ATGTATCTATCTTCCATAGCTTCTCTGTTCCCCAAAACCCTAACTGCCATTCCTTTCCTTCACCGAACCCGAACTCATTCTCCAAAACTAAACGCTATTCGAACTATGAGTTCCGGGTCCACCCAGCGTATCTTCCAGCTCAAGCTCGACCCGCTAACCGGTACCTCTGAATGGGTAGTCATCGAAGAAGAAGACGACGAACAAAGCTTCACCGATAATTTCCACCAGCCTCTTCTCGCCACGACGTCGTATTTGGACATGCTCAATGACTCCGCCAGAAACAGAGCATTTCGCGAAGCCATTGAGAAAACCATCACCAAACCTTGCCATGTTCTTGATATCGGTGCTGGAACTGGGTTGCTTTCGATGATGGCTGTGCGAGCTATGGGTGGCAAAGGGACGGTAACGGCGTGTGAGTCTTATCTTCCGATGGTGAAGTTGATGAAGAAGGTGCTGCGCCTTAATGGAATGGAAGGAAGAATCAAAGTCATCAACAAACGCTCTGATGAACTCAAACTTGGCCTTGATATCCCTTCACGTGCAGATGTTCTTGTAAGCGAGATACTAGATTCAGAATTACTTGGTGAGGGGCTTATACCTACCTTACAACATGCGCATGATAGTTTGTTGGTGGAAAACCCTCTCACTGTGCCATATCGAGCAACTACATATGGACAGCTGGTTGAAAGCAAATTCTTGTGGCAGCTGCATGATTTGCATAACAATGAGGCTGGTGCATCTGATGGCATTCGTCTTACCCCTCCGGGACTTGATAGTGTTTTAAGTGTCAAACGTCAGCAATATGCCATGCATTGTGATCCGATAGGAGAAGAAATAAAACCACTTTCAGAAACCTTCAAAATTTTTGAATTTGATTTTTGGAAACGGCCAGAGAGTAATGGAGAAACTGAGCTGTGCATAAAGGCAACTAATGATGGTAGAGTTCATGCTGTCATATCTTGGTGGGTACTCCAACTTGATCGTGAAGGGACAATCTATTATTCCACTGCTCCTAGATGGATAAACTCACCAACAATTAAAAGTGAGGGATGCTGCATTGATGCTACACCAGGTCCTGTTGATTGGTGTGACCACTGGAAACAGGGTGTTTGGTTTGTTCCAGGCAGTGGCATTTCCACATTCAAAGGGGAAGAAATTCATTTACATGCTACTCATACTGATACTACTATATCATATAATTTATATTCGCAAGCACCAACTGCTAAGGTTGTACATCATGGGTTGAGGACTGGAGATTTGCAGCTTGTACTGCCACTAGAACGGGCTGCAATCTATGGAGACAGGGGATGGAGGCTTTCAATGTTGAAAGCACTAGAAAGTGTGTTGCAGGGGAGAGGTTGCTCATTATGCATGGTTGCAGATGATAGTGTGTTTTTACCTCTTCTTGTGGCACATCTTTCCGAAACACCACATATAATATCATTACTTCCGGGGCTAAAGGAAAGGGGTCTCCAATATTTGCAAGCTGCTGCCCAAGCAAATCGTTTGTCACCTAATCGCATAGAAGTTCTTGAAAAAAGGGTGAAACAGTTAACCATGAATGATACGAATCAGAAAAAGGTTGATCTGTTAATAGCAGAACCTTTCTATTTTGGACACGATGGCATGCTTCCATGGCAGAACCTGCGATTTTGGAAGGATCGTACGACACTTGATCATACCCTCTCTGAAGATGCTCTGATAATTCCTAGTAAAGGAATATTGAGGGCTTGTGCCATCTATCTTCCTGATCTTTGGAAAAGTCGTTGCTGCTTGAGTAAGATAGAAGGTTTTGACCATTCAGTGGTAAATGCCACATTGGGGGCCTGCGGTCATCTACCTGAATTGGAAGAGGGTCCTTGTCTGCCCTTTTCTGTCTGGCAATGTGGAGAATTTGATGTGCTTAGTGAGACATTTGATGTGATGGAGTTTGATTTTTCAAAACAAATATGCCAATGTCAAGGAAAATCCCAGGTTAAATTCACCAAGACTGGGGTTTGTCATGGGTTTGTACTATGGATTGACTGGGTGATGGATCTGCAAAATTCTGTTGTGATATCAACTGGTCCAGATAAGAGATATTGGAAGCAGGGAATAAAGCTTCTTGCAACACCTAAAACAGTAGGACCCCAAAGATCGAGAGATGTCCAAGCATGTTGTTCTGCAGTTCTTGAAGCATGTTTTAATCCGTTAAAGGGGGAACTCAAAATTATACTTGATTTCTTATGA 2229 0.4352 MYLSSIASLFPKTLTAIPFLHRTRTHSPKLNAIRTMSSGSTQRIFQLKLDPLTGTSEWVVIEEEDDEQSFTDNFHQPLLATTSYLDMLNDSARNRAFREAIEKTITKPCHVLDIGAGTGLLSMMAVRAMGGKGTVTACESYLPMVKLMKKVLRLNGMEGRIKVINKRSDELKLGLDIPSRADVLVSEILDSELLGEGLIPTLQHAHDSLLVENPLTVPYRATTYGQLVESKFLWQLHDLHNNEAGASDGIRLTPPGLDSVLSVKRQQYAMHCDPIGEEIKPLSETFKIFEFDFWKRPESNGETELCIKATNDGRVHAVISWWVLQLDREGTIYYSTAPRWINSPTIKSEGCCIDATPGPVDWCDHWKQGVWFVPGSGISTFKGEEIHLHATHTDTTISYNLYSQAPTAKVVHHGLRTGDLQLVLPLERAAIYGDRGWRLSMLKALESVLQGRGCSLCMVADDSVFLPLLVAHLSETPHIISLLPGLKERGLQYLQAAAQANRLSPNRIEVLEKRVKQLTMNDTNQKKVDLLIAEPFYFGHDGMLPWQNLRFWKDRTTLDHTLSEDALIIPSKGILRACAIYLPDLWKSRCCLSKIEGFDHSVVNATLGACGHLPELEEGPCLPFSVWQCGEFDVLSETFDVMEFDFSKQICQCQGKSQVKFTKTGVCHGFVLWIDWVMDLQNSVVISTGPDKRYWKQGIKLLATPKTVGPQRSRDVQACCSAVLEACFNPLKGELKIILDFL. 743
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g01876 742 Pfam Ribosomal protein L11 methyltransferase (PrmA) 99 191 - -
Seca11g01876 742 PIRSF Arg_N-mtase 42 741 IPR014644 GO:0006479|GO:0008168
Seca11g01876 742 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 84 400 IPR029063 -
Seca11g01876 742 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 408 742 IPR025799 GO:0016274|GO:0018216
Seca11g01876 742 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 491 710 IPR029063 -
Seca11g01876 742 FunFam Protein arginine N-methyltransferase 77 219 - -
Seca11g01876 742 FunFam Protein arginine N-methyltransferase 7 420 570 - -
Seca11g01876 742 CDD AdoMet_MTases 111 186 - -
Seca11g01876 742 Gene3D Vaccinia Virus protein VP39 77 219 IPR029063 -
Seca11g01876 742 Gene3D Vaccinia Virus protein VP39 422 570 IPR029063 -
Seca11g01876 742 Gene3D - 220 415 - -
Seca11g01876 742 FunFam Protein arginine N-methyltransferase 1.6 574 741 - -
Seca11g01876 742 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 494 711 IPR025799 GO:0016274|GO:0018216
Seca11g01876 742 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 63 402 IPR025799 GO:0016274|GO:0018216
Seca11g01876 742 Gene3D - 574 741 - -
Seca11g01876 742 FunFam Protein arginine N-methyltransferase 1.6 220 416 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g01876 Seca-Chr11 22803516 22808348 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g01876 84 224 C2H2 Transcription Factor Family AT3G12270 32.000 1.01e-11 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g01876 K11438 - gmx:100785846 1252.27