Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g01842 ATGACAATGGCAAAGCGTGCGATGCGAATGAGGATGTTCACTGAAAGGTATACAAGCCTAGCATCTCTACCTCTTCATGGTTCTAATTTTCAATCTCTTGGTGTTGAAGCTCATGCTGTAATGCACCAAAGACACATGCCATCACCATCACTGAGGGCTCCTGATGTGAGAGCTGCAGTAAAATTTGAGAAAGACTATTTTGGAACACCAATCTTCATGCAAGATGATGATGTTGGTTTATTTTGGCCTGCCAGTTTCCGGCAGGTGGAAAGAGAATTTAGTGAAGGCATTAAATCTCTACAATGGAATAAGGATAAAGTGAGGGAGCTAGAAATGAAGCTTAAATCTGTGCAAGAGGAATTAATTTCAGCTAAAGATGCTGCTGCAGCCAACAAAGAGCGATTATCCGCTGAACTCTCCACTCAAATCTTGCAAGCCATTGAGTTTGTGACTATCATATTAGTTGAAGTCAAAGAAGCAGTGGCTCTAAATTCCTTCAATCTGTTCAAATACAACCCAACTTGTGATACAATGGGGAGTGGTGCAGAGGATATTGATGTCTATATGATAACAAGGAAGAAATGGCACAAAATCCGAATAAGGAAGATGTCCCTAAAGCCACATCTGGTGAAATAG 636 0.4088 MTMAKRAMRMRMFTERYTSLASLPLHGSNFQSLGVEAHAVMHQRHMPSPSLRAPDVRAAVKFEKDYFGTPIFMQDDDVGLFWPASFRQVEREFSEGIKSLQWNKDKVRELEMKLKSVQEELISAKDAAAANKERLSAELSTQILQAIEFVTIILVEVKEAVALNSFNLFKYNPTCDTMGSGAEDIDVYMITRKKWHKIRIRKMSLKPHLVK. 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g01842 211 Coils Coil 100 138 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g01842 Seca-Chr11 22263626 22266260 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g01842 2 121 C2H2 Transcription Factor Family AT1G66140 30.556 9.69e-14 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g01842 - - gmx:100792169 139.043