Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g01829 ATGGCGAGTGGATGGATGAAGTCATTGCAATGCAAGTCAAGAGCATTTGAAGATGTGTATCACCCAAATCCCAAAATCCTTATACCCAGTGCTAGTTGCAGAAAAAGCGTTCAAACGATTAAAGACATGGTGGACATGTCCAAGCCCAAGCCCAAGCCCAGAAAATCAAAGCCTAAGCCTAGGCCATCCTTGGAAAAACATCCAAGTTCAAAATACCCAACGACCACCACAAAGCCCGAATTCGAAGTGCCAAAAGCCACCATGAACCGCTCAAGAAGTAGTAGCGTTAACACTACTAACACTACCACCTCTTCACGTGCTATCACTGAACTTCCTGAGGGACACCCTTCCAGAAACGTCGTTGAGATTATCTTCCACACAAGCTGGGGGCCCAAGCCATTTCCGGGTCGGGTCGAGATGATTTTCAAGGTCCAAAACGGGTCAAAGACCGTGTCGCGATTTGAGGAGTTTCGCGAGACGGTGAAGACACGCGCCGCTGCTTCTCAGGGTTTGGATGAGGGGAGCAACTGGGAGGAGAATGAGCGGTGTGTCGCCGATGGGAATGAGGTCATGCGGTTTCACTGCTTGGGCCCCGCCGAGGATGGTGGTTCCTACGGCGGCGGCGGTGCGTGGTCGTTTCCGGAGAGAAAGGGCTCGGCGGCGATCTGCACGTTTTCTGGCAGTGGCGAGGCGCATGAGGCTGCCGGCGGAGGCAGGGGCAGAAGGGCAATGCTGGTGTGTCGGGTCATAGCGGGTCGGGTCTCAAAGCAAATCGGGTTTCTGGACTCGTTGTTGGACAAGCGAGTCGGGTTCGACTCAGTGAGTGGGGACAATGGCGAGTTGTTGGTGTTCGATCCGCGTGCGGTATTGCCCTGCTTTCTTATTATTTACAGGTTGTAA 900 0.5344 MASGWMKSLQCKSRAFEDVYHPNPKILIPSASCRKSVQTIKDMVDMSKPKPKPRKSKPKPRPSLEKHPSSKYPTTTTKPEFEVPKATMNRSRSSSVNTTNTTTSSRAITELPEGHPSRNVVEIIFHTSWGPKPFPGRVEMIFKVQNGSKTVSRFEEFRETVKTRAAASQGLDEGSNWEENERCVADGNEVMRFHCLGPAEDGGSYGGGGAWSFPERKGSAAICTFSGSGEAHEAAGGGRGRRAMLVCRVIAGRVSKQIGFLDSLLDKRVGFDSVSGDNGELLVFDPRAVLPCFLIIYRL. 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g01829 299 Gene3D - 106 298 - -
Seca11g01829 299 SUPERFAMILY ADP-ribosylation 108 298 - -
Seca11g01829 299 MobiDBLite consensus disorder prediction 68 110 - -
Seca11g01829 299 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 5 297 - -
Seca11g01829 299 MobiDBLite consensus disorder prediction 38 111 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g01829 Seca-Chr11 22064936 22065835 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g01829 104 298 C2H2 Transcription Factor Family AT5G54630 36.842 2.01e-33 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g01829 - - gmx:100792099 417.157