Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g01822 ATGCTTAGCCGATTGCATCACCGTAACCTTGTAAAACTGGTGGGATACTATAGTAGTCATGACTCATCACAAAATCTACTTTGCTATGAGCTTGTCCCTAGTGGAAGTTTGGAAGCTTGGCTTCATGGTCCCTTGGGAATAAATTGTCCTTTGGATTGGGACACCAGAATAAAAATTGCTCTTGATGCTGCAAGAGAACTTTCATACCTGCATGAAGACTCACAGCCCTGTGTAATACACAGAGATTTCAAGGCATCCAACATATTGCTTGAGAACAATTTTCATGCTAAGGTTGCAAATTTTGGTCTTGCTAAGCAGGCACCTGAAGGCAGATCTAATTATTTGTCTACTCGTGTCATGGGCACATTTGGGTATGTAGCTCCTGAGTATGCCATGACTGGGCACTTACTTGTTAAAAGTGATGTTTATAGATATTGGGTTGTCTTGCAAGAACTACTTACTGGAAGGAAATATGTCACAGCCAAGTGGACAAGAGAACCTTGTTACTTGGTTTATTATTCCTTTCAGGCTAGACCAATCTTGAGAGACAAGGACCGGCTGGAAGAGATTGTTGATCCCAAACTTGGGGGAAAGTATCCAAAGGAAGATTTTGTTCGTGTGTGCACTATTGTTGCAGCCTGTGTTGCTCCTGAAGCAAGCCAACGACCCACAATGGGTGAAGTGGTACAGTCACTTAAAATGGTGCAACGCATCACAGAATATCAAGATTCTATGTTAGCCTCATCTAATACACGGCCAAACCCGAGACAGTCCTCTAGCACTTTTGAGTTTGACAGAACATCTTCAATGTTCTCATGTCCTTACTCTGGTCTAAGTGCTGCCTTTGACAATGAGAACATTTCTAGGACGGTGGTTTTCTCTGAAGATCTTCATGAAGGACGATGA 906 0.4249 MLSRLHHRNLVKLVGYYSSHDSSQNLLCYELVPSGSLEAWLHGPLGINCPLDWDTRIKIALDAARELSYLHEDSQPCVIHRDFKASNILLENNFHAKVANFGLAKQAPEGRSNYLSTRVMGTFGYVAPEYAMTGHLLVKSDVYRYWVVLQELLTGRKYVTAKWTREPCYLVYYSFQARPILRDKDRLEEIVDPKLGGKYPKEDFVRVCTIVAACVAPEASQRPTMGEVVQSLKMVQRITEYQDSMLASSNTRPNPRQSSSTFEFDRTSSMFSCPYSGLSAAFDNENISRTVVFSEDLHEGR. 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g01822 301 Pfam Protein tyrosine and serine/threonine kinase 1 232 IPR001245 GO:0004672|GO:0006468
Seca11g01822 301 SUPERFAMILY Protein kinase-like (PK-like) 2 234 IPR011009 -
Seca11g01822 301 ProSiteProfiles Protein kinase domain profile. 1 235 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca11g01822 301 Gene3D Transferase(Phosphotransferase) domain 1 1 265 - -
Seca11g01822 301 PANTHER OS01G0750732 PROTEIN 1 251 - -
Seca11g01822 301 FunFam Receptor-like serine/threonine-protein kinase ALE2 32 251 - -
Seca11g01822 301 ProSitePatterns Serine/Threonine protein kinases active-site signature. 78 90 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g01822 Seca-Chr11 21957934 21959176 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g01822 1 301 Receptor kinase-like Gene Family AT4G02010 80.858 2.90e-172 493
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Seca11g01822 PK_Tyr_Ser-Thr 7.1e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g01822 - - cill:122318716 505.753