Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g01811 ATGATCAGGAAGCCCCACAAGTGTCTTGCCTTGAACCCCATCTATGTAATCTTCAAATTGGTGCGGTGTCTTGGACCAGGAACCAATGGATTGTGTTTTCTAAATTGGGAACCCAAGTATCTACGGTTGGGCCATAGCCCAATAGAACTACCAAAGGGACATTTGGCAGTGTACGTGCGCGAATCCGAGGAAGAGAAGCAACGGGTATTGGTACCTGTTACATTCTTCAATCACCCTCTGCTTCGAAAGCTATTGGAGGAGGCAGAGAAAGTTTATGGGTTCGATCATCCTGGTGTGATAACTATACCCTGTGAAATCTCCGAGTTTGAGAGAATTCAGAAGACTATTGCCACCACACAAGGCTACTATTGGAAGCGTAGCTTTGATGTTCCGTCCCGTAGGAAAAAAGTGAAAGAAAAATGA 423 0.4515 MIRKPHKCLALNPIYVIFKLVRCLGPGTNGLCFLNWEPKYLRLGHSPIELPKGHLAVYVRESEEEKQRVLVPVTFFNHPLLRKLLEEAEKVYGFDHPGVITIPCEISEFERIQKTIATTQGYYWKRSFDVPSRRKKVKEK. 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g01811 140 Pfam Auxin responsive protein 48 114 IPR003676 GO:0009733
Seca11g01811 140 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 44 111 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g01811 Seca-Chr11 21792208 21792630 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g01811 47 116 Calmodulin-binding Proteins AT3G43120 48.571 1.42e-16 70.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g01811 K14488 - gmx:102668727 173.326