Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g01805 ATGGCAGAAAGACTACTCAGCCTTTCTTTTCTGGTCCTGAGCCTTGTCCTTTACATGGCTGCTAGCACTGCAGAATCCGCAGTTGCAAGAAGACCCAACCCCAACCCAATAGACTTCATAAAATCCTCATGCAGGGCCACACTCTACCCTGCTGTGTGCGTTCAAAGCCTCATGGGTTATGCAAACGTGATTCGCCAAGACGAGCATCAACTAGCCATCACAGCCTTGAATGTGAGCGTATGGAGGACTCGTTCAAGTGCATCATTTATGAAGAAAATGAGCAAGGTAAAGGGGATTAAGCCTAGGGATTACGGTGCTGTACAAGACTGCAAAGAGAACATGGATAATAGTGTGGACCGTCTTAACCAATCGGTTAAGGAGCTTGGGCTTACGGGTAAGGCCTTGGGCCAGGACCCAATGTGGCACATGAGTAACGTTCAGACTTGGGTCAGTGCTGCTCTAACGGATCAGAACACGTGTCTTGATGGGTTTGCCAGTCCTCACGTGGATAGAAAGTTGAAGGCTACCATTAGTGCCAGGGTTGTTGATGTTTCTCAAGTCACTAGTAATGCTCTTGCATTGGTTAATCGCTTTGCCTCCAGGTACCGTACTGCTGCACACAACTGA 627 0.4833 MAERLLSLSFLVLSLVLYMAASTAESAVARRPNPNPIDFIKSSCRATLYPAVCVQSLMGYANVIRQDEHQLAITALNVSVWRTRSSASFMKKMSKVKGIKPRDYGAVQDCKENMDNSVDRLNQSVKELGLTGKALGQDPMWHMSNVQTWVSAALTDQNTCLDGFASPHVDRKLKATISARVVDVSQVTSNALALVNRFASRYRTAAHN. 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g01805 208 Gene3D Invertase/pectin methylesterase inhibitor family protein 37 198 IPR035513 -
Seca11g01805 208 Pfam Plant invertase/pectin methylesterase inhibitor 38 194 IPR006501 GO:0004857
Seca11g01805 208 CDD PMEI-like_3 42 200 - -
Seca11g01805 208 PANTHER PECTINESTERASE INHIBITOR-LIKE 6 194 - -
Seca11g01805 208 NCBIfam pectinesterase inhibitor domain 7 196 IPR006501 GO:0004857
Seca11g01805 208 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 38 198 IPR035513 -
Seca11g01805 208 SMART PMEI_2 35 194 IPR006501 GO:0004857
Seca11g01805 208 FunFam Pectin methylesterase inhibitor 1 35 198 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g01805 Seca-Chr11 21710756 21711382 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g01805 19 195 Carbohydrate Esterase AT3G14310 28.333 1.06e-22 93.6