LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Seca11g01766	ATGATTCTCCTCTCAACTTTGTTTCAAAACCTCAACATGAAGGATTGGTACAGTGACAACACAACCCTGCTAGTAGCATTATTGGTCATTTCTACCTTTACTTGGTACACATGGTTGTATTTCCTCAAACCCAATACCCAAAGGCTGCCACCAGGCCCATCGGGCCTCCCCTTCTTCGGGAACCTTTTATCCCTGGACCCGGACCTTCACACTTACTTCGCCGGGTTGGCCCGTACCCATGGCCCAATTTTCAAGCTCCAACTCGGGAGCAAGCTTGGTATCGTGTTGTCTTCACCTTCCATGGCTCGCCAAGTGCTCAAAGACCACGACACCGTTTTCGCCAACCGTGACGTGCCCGCCGCCGGCAGGGTAGCCACCTACGGCGGGTCCGACATAGTATGGACCCCGTACGGACCCGAATGGAGGATGCTGAGGAAAGTATGCGTGCTCAAGATGCTCAGCAACACAACCCTTGATTCCGTGTACGATTTACGACGCAAGGAGGTTCGAAAAGCAGTGGGTTATCTTCACAATCGGGTCGGGTCTCCGGTGAATGTTGGGGAGCAGGTGTTCTTGACGGTGCTGAACGTGATCACGAACATGATGTGGGGCGGGGCGGTTGAAGGAGCAGAGAGGGAAAGCTTGGGGGCGGAGTTCAGGGAGGCGGTGGCGGAGATGACGGAGCTTCTAGGGAAGCCAAACTTGTCAGACTTCTTTCCCCGGTTGGCCCGATTCGATTTGCAAGGTGTGGAGAAACAGATGCATGCTTTGGTCCCGCGTTTCGATAGAATATTTGAAAAAATGATCGGTGAACGAGTGAATAGGGAGAAGGATGGGAAGGAGAGTGAAAGCAAGGATTTTCTGCAGTTTTTGTTGAACTTGGAGGAGGAAGGTGATTCCAAGACACCATTCACCATCACCCACATTAAGGCCCTCCTCATGGTACGTTTATTCCAAGAAATTTTTATTTTTATTTGTCTTTTAATTTTCAACTTCTATCAAGTGATTAAGTTAAACACATATACAAATAATATATATATATATATATATTATTAA	1056	0.4839	MILLSTLFQNLNMKDWYSDNTTLLVALLVISTFTWYTWLYFLKPNTQRLPPGPSGLPFFGNLLSLDPDLHTYFAGLARTHGPIFKLQLGSKLGIVLSSPSMARQVLKDHDTVFANRDVPAAGRVATYGGSDIVWTPYGPEWRMLRKVCVLKMLSNTTLDSVYDLRRKEVRKAVGYLHNRVGSPVNVGEQVFLTVLNVITNMMWGGAVEGAERESLGAEFREAVAEMTELLGKPNLSDFFPRLARFDLQGVEKQMHALVPRFDRIFEKMIGERVNREKDGKESESKDFLQFLLNLEEEGDSKTPFTITHIKALLMVRLFQEIFIFICLLIFNFYQVIKLNTYTNNIYIYIYY.	352

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Seca11g01766	351	SUPERFAMILY	Cytochrome P450	40	318	IPR036396	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Seca11g01766	351	Gene3D	Cytochrome P450	42	326	IPR036396	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Seca11g01766	351	PANTHER	OS08G0547900 PROTEIN	13	314	-	-
	Seca11g01766	351	PRINTS	E-class P450 group I signature	77	96	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Seca11g01766	351	PRINTS	E-class P450 group I signature	193	211	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Seca11g01766	351	PRINTS	E-class P450 group I signature	101	122	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Seca11g01766	351	Pfam	Cytochrome P450	50	317	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Seca11g01766	Seca-Chr11	21029837	21030892	Dispersed/Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Seca11g01766	20	314	Cytochrome P450	AT4G12320	54.849	1.26e-114	340

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Seca11g01766	-		-	gmx:100783085	467.618

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