Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g01752 ATGACAAAGAAGATCGAGCATCTAGAACTTTCCAAAAGGAAGCTTTTGGGAGATGGATTGGATATATGTGCTATTGACGAGTTACAACAGATAGAGAACCAGCTCGAACGCAGCTTAAGCAAAATTAGGGCAAAAAAGAGTCAATTGTTCAGGGAGCGAATTGAGAAGCTAAAAGAAGAGGAAAGGCTCCTACTTGAAGAAAATAGACGCTTACGCGAGCAGTGTCGGATTGAACAACAGCGTTCTTTAAGTAAAGAAGATGTGGAACTCATCACAGAAAAGCATGGCGAGGAGGAAGTGGAGACGGAGTTGTTCATAGGGCGACCAGAGAGACGAATGCCTTGA 345 0.4348 MTKKIEHLELSKRKLLGDGLDICAIDELQQIENQLERSLSKIRAKKSQLFRERIEKLKEEERLLLEENRRLREQCRIEQQRSLSKEDVELITEKHGEEEVETELFIGRPERRMP. 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g01752 114 Pfam K-box region 1 75 IPR002487 GO:0003700|GO:0005634|GO:0006355
Seca11g01752 114 Coils Coil 25 74 - -
Seca11g01752 114 ProSiteProfiles K-box domain profile. 1 83 IPR002487 GO:0003700|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g01752 Seca-Chr11 20788754 20790935 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g01752 1 112 MADS-box Gene Family AT4G22950 55.652 4.33e-31 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g01752 - - gmx:100805260 133.265