Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g01749 ATGGCTTCGAGATATGATTTTATTAAGGATGTTAATGGTGGATCTGAATATAAGATATGGAGGCTGAAAGTAAGGGTTATCCGTTTATGGAGATTTGCTAACTTTCAGGAAAACAACAACAGTAATGTTAAACCAATGATAGAGATGGTGGTTCTTGATGAGCAGGGTGGCAGGATTCAATGCACTGTGAAGAGTTTCCATGTTTATCTTTTTGAACAGAATTTGGTAGAGGATAATGTGTACATGATATCTAATCTCAATGTTGCTCTGAATTCTGCGAAGTTTAAACCCACTTCACATGAATTCAGAATGTTTTTTAAGAGGGAAACTGAGGTTCGTTGGGTTGAGGATTCCACCATTCCGGTAAATGCTTTTTGTTTTGTTCCATACAATGATATTCTCAATGAAAGTAATGAAGAACGTCATTTAGTTGGTATGTTTTCAATTGAAACTAATACTTTCTCTATGATGATGACAATCTTAAAATTGAAATTAAAAATAACTTTTTTATTTCATACTTTGATATATAGATGTTGTTGGTCTTCTTTCTGCCAAAGGAGACCTTATTGA 570 0.3351 MASRYDFIKDVNGGSEYKIWRLKVRVIRLWRFANFQENNNSNVKPMIEMVVLDEQGGRIQCTVKSFHVYLFEQNLVEDNVYMISNLNVALNSAKFKPTSHEFRMFFKRETEVRWVEDSTIPVNAFCFVPYNDILNESNEERHLVGMFSIETNTFSMMMTILKLKLKITFLFHTLIYRCCWSSFCQRRPY. 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g01749 189 Pfam Domain of unknown function DUF223 48 139 IPR003871 -
Seca11g01749 189 CDD RPA1_DBD_A_like 21 112 - -
Seca11g01749 189 SUPERFAMILY Nucleic acid-binding proteins 7 117 IPR012340 -
Seca11g01749 189 Gene3D - 7 118 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g01749 Seca-Chr11 20630719 20631357 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g01749 20 184 Core DNA Replication Machinery Family AT5G45400 26.316 4.75e-08 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g01749 - - adu:110274503 164.851