Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g01738 ATGGCTTCTAGTTCTGGAAAACGACGTTTGTGTGATCATTTTTCTGTTATACAAACCACCAAACATGCCCCAAGGCCTTCCCTTTTACTCAAAGACTACCTCAGGGACGATTTAAGCTCGTGTTCATCGAGCGGTTTCAAATCGTTTCCGCGCCGACAATGCTGCTCAACCGTTGGATTGAAAGATCTCCAACTCAAACACAAGAGGAGAAACACGTTCCCTCGACGAACCACTCCTTCTTCTTCTACCATAACGGTTCTGCAGAGAGCTTCCGAAGCAGTAATCAACGTCATCAAGTCACTGCCTTTGTCACAAAAGAGCGCCAAAGCTAAGAAAGCTGCTACGTATCTTCTTTCTAGAAGCCTCTCGAGGAAGCTGTTGAGCAAAAGCTTCTGGAGAAAAGCAGCAGCGAAGGAAGAGGGAATCAGCAAATGTGCCCCGAGGAGAAGGAGATCTTTCCGCGAACTCCTTTTGCAGGAACGAGATCATAAAGCGACGTCGTTCAATGAGGATACTATATTCACTGCCCCAAGCATCATCACAACCACCACCTCATCTTCAGGTTGTGGCAGTAACAGCTGGGGAGAGAGCGAGTTCACTTTCTCATCAACCGCCACTTCTTCTGACAGCTACACCGAAAATGACCTACTTGACGGTACCAAAGATGGTGAGCCACATTATAAGATCGAAGGAGTAACAACCACGCAGGATTGGCCAAATGAGAAGGAACAATTCAGTCCAGTATCAGTGCTAGATTTCCCATTTGAAGATGAAGAAGAAATTAAGTCACATTTCAATTCCTCTGCTCCTTCCTTCTTAGAAGGATCCAAACACAAGCATATCCCGAAGAGACGGCATTTTAAAAGTGTAGCATCACTAGAGCCAGTGGCATTAGAGAAAAGGATCGCATTGTCAGAACAGAAAGATGAACCTCACAACCATTCTACAAAACAATGTTCATTATTAGCCAAAAATGGAAACAGGAACGTTCTTAATGACAAGATCGAAGAGAATGCGTGCAACCTTCTCAATTTGGTTAAAAGGTCACATCCATTCAACAGTTTGATAATTAAGGCAGAGAACCTACTGTTTGATTACTTCAAGCAGAGCATTGGGGAAAATAATGATATTGATGACCATTCAAAGAAGCTTCACCTTTGCAAGGTAGTTGAGGATTGGATACAAGGGAAAAACCAAGAACTGTATTTGGGTTGGGAAGTGAAAGAAGGAAGAGGGATCTACATTAGGGAGATGGATAAGTGTGGGGAGTGGAAAAACTCTGATCAAGAAAACCAAAAATTGGCTCTGGAGCTGGAAAACGAGGTCTTCAATAGTTTGATTAACGAGCTCGTCCTTGACCTCACCATCTGA 1371 0.4369 MASSSGKRRLCDHFSVIQTTKHAPRPSLLLKDYLRDDLSSCSSSGFKSFPRRQCCSTVGLKDLQLKHKRRNTFPRRTTPSSSTITVLQRASEAVINVIKSLPLSQKSAKAKKAATYLLSRSLSRKLLSKSFWRKAAAKEEGISKCAPRRRRSFRELLLQERDHKATSFNEDTIFTAPSIITTTTSSSGCGSNSWGESEFTFSSTATSSDSYTENDLLDGTKDGEPHYKIEGVTTTQDWPNEKEQFSPVSVLDFPFEDEEEIKSHFNSSAPSFLEGSKHKHIPKRRHFKSVASLEPVALEKRIALSEQKDEPHNHSTKQCSLLAKNGNRNVLNDKIEENACNLLNLVKRSHPFNSLIIKAENLLFDYFKQSIGENNDIDDHSKKLHLCKVVEDWIQGKNQELYLGWEVKEGRGIYIREMDKCGEWKNSDQENQKLALELENEVFNSLINELVLDLTI. 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g01738 456 PANTHER OS04G0572500 PROTEIN 22 454 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g01738 Seca-Chr11 20302029 20305477 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g01738 28 456 TRM (TON1 Recruiting Motif) Superfamily AT4G23020 28.184 7.87e-34 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g01738 - - gmx:102663212 437.573