Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g01728 ATGTTGGCTGGTTGTTCTAGTTCAACATTGTTGTCACCAAGGCACAGATTGAGGAGTGAAGCATCTGCACAATTTCAAGCTTGTCATTTACAGTTACCTTCGATGAGCACACAGAGATTGGACTTGCCATGTAGCTTCCCAAGGAAAGACACCACATCCTCACGTTCACAACCTTTGAGGCCTGTGGGGATTTCAGTGGAGAAGCCTATTGAAGCCAAGAACAACACTTGTTCTCTGAAGCAGAACATTCGACTTCCACCTTTGGCAACAACCACAAGCGCTCAAACAACAGCGCCATTTGGAGAGATCAAGGAGGAGCTTTGGGAGAAAAGCAGCAAGGGTTTGAAGAGGCAGCTTTCAGAACATCATGATGAGTCCTTCACCAACAGAGCTAAGAGGAAAAGGGGTAGCAGTGGTAATAATGGAAATGATTCTGATGAAGGTTTGAGTTTAGCAGCTCAAATGGGTGCTGGCAATTTTTGGTCTGTTCAGAGTTTTGGAGGTCTTAACCACCCTTCACTTCCTTTCTCTCTCAATTGTTCTGGAGATGAGGAAAGTGTCATTTTTGCTCCTGCTGAAGTGGTTTCTGCTCCTTTGCCTTTATCCAACAATCCTTGGCTGGAATCTGCTGTAACAAAGATCACCAATTTTGGTGAGGGTAGCCACCACCAACAACATCATCACCATGTCAAGGAAGGTTCAGTCTCTAATGCTTCATCAGAGAGCCAGAGCTTGAGCCTGAGGTTAAATGAGAATGCATCAGAACATGAAGTGGGGAATGGTTCAGAGAATCCTTATCACCATGAAGGCACTGAGGTGGAGACAGGAGAAGAGGATGAACAAGAGGAGAATCGTGGGTTTGAGCTTGTTAGCTTGCTCACTGGTTGTGTTGATGCTATTGGATCAAGGAATGTCACTGCAATCAACCATTTCATAGCCAAATTGGGTGATCTTGCATCTCCAAGGGGAACCACCATAAGCCGGATTTGTGCTTATTTTACTGAGGCTTTGGCCATCAGGGTCACCAGGCTTTGGCCTCATATCTTTCATGTCACCACCACTTCTAGGGACCTAGATAGGGTGGTGGATGATGATGAAACTGGCACTGCATTGAGGCTTCTAAACCAGGTTAGCCCAATTCCCAAGTTTCTTCATTTCACATCAAATGAGATGCTGTTGAGGGCTTTTGAAGGGAAAGACAGGGTTCACATTATTGATTTTGACATCAAGCAAGGACTTCAATGGCCTAGCTTGTTCCAAAGTTTAGCTTCAAGGGCTAATCCTCCAAGCCATGTTAGAATCACTGGTGTAGGAGAGTCCAAACAAGAGCTGAATGAAACAGGAGACAGACTTCATGGGTTTGCTGAGGCATTGAACCTTCCCTTTGAGTTTCATCCAGTGGTGGATAGACTAGAAGATGTGAGGCTTTGGATGCTTCATGTGAAGGAACATGAGAGTGTTGCTGTGAATTGCGTTTTGCAGCTTCACAAGACACTTTATGATGGTAGTGGAGGAGCATTGAGGGATTTTTTGGGTCTCATTCGTAGCACAAATCCTACTATTGTGGTTACGGCAGAACAAGAAGCAGAACACAATGAGGCCAGGTTGGAAACAAGGGTGTGCAATTCATTGAAGTATTATGCAGCTCTATTTGATTCAATTGATCACAGTGGCCTTCCACAAGAGAGTCCAGTGAGGATTAAGATAGAGGAGATGTATGCTAGGGAAATCAGGAACATCATTGCATGTGAAGGAAGGGACAGGTTGGAGAGACATGAGAGTTTTGGCAATTGGAGAAAGATGATGGTGGAGCATGGAGGGTTCAGATGCATGGGAGTTACAGAGAGGGAAATGATTCAGAGCCAGTTGCTGTTGAAGATGTATTCTTGTGAGAATTACAGTGTCAAGAAGCAGGAGAAGGAAGGAGCAGCAGCAGTTACTTTGGGTTGGCTTGATCAACCTCTATATACAGTCTCAGCATGGGCACCAGTTGATGCTGCTGGCAGCTCATCCTCTTTTTCTCAGCCAATTTGA 2034 0.4503 MLAGCSSSTLLSPRHRLRSEASAQFQACHLQLPSMSTQRLDLPCSFPRKDTTSSRSQPLRPVGISVEKPIEAKNNTCSLKQNIRLPPLATTTSAQTTAPFGEIKEELWEKSSKGLKRQLSEHHDESFTNRAKRKRGSSGNNGNDSDEGLSLAAQMGAGNFWSVQSFGGLNHPSLPFSLNCSGDEESVIFAPAEVVSAPLPLSNNPWLESAVTKITNFGEGSHHQQHHHHVKEGSVSNASSESQSLSLRLNENASEHEVGNGSENPYHHEGTEVETGEEDEQEENRGFELVSLLTGCVDAIGSRNVTAINHFIAKLGDLASPRGTTISRICAYFTEALAIRVTRLWPHIFHVTTTSRDLDRVVDDDETGTALRLLNQVSPIPKFLHFTSNEMLLRAFEGKDRVHIIDFDIKQGLQWPSLFQSLASRANPPSHVRITGVGESKQELNETGDRLHGFAEALNLPFEFHPVVDRLEDVRLWMLHVKEHESVAVNCVLQLHKTLYDGSGGALRDFLGLIRSTNPTIVVTAEQEAEHNEARLETRVCNSLKYYAALFDSIDHSGLPQESPVRIKIEEMYAREIRNIIACEGRDRLERHESFGNWRKMMVEHGGFRCMGVTEREMIQSQLLLKMYSCENYSVKKQEKEGAAAVTLGWLDQPLYTVSAWAPVDAAGSSSSFSQPI. 678
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g01728 677 MobiDBLite consensus disorder prediction 114 149 - -
Seca11g01728 677 MobiDBLite consensus disorder prediction 235 259 - -
Seca11g01728 677 ProSiteProfiles GRAS family profile. 280 662 IPR005202 -
Seca11g01728 677 MobiDBLite consensus disorder prediction 220 234 - -
Seca11g01728 677 MobiDBLite consensus disorder prediction 114 140 - -
Seca11g01728 677 MobiDBLite consensus disorder prediction 219 284 - -
Seca11g01728 677 Pfam GRAS domain family 289 661 IPR005202 -
Seca11g01728 677 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 240 658 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g01728 Seca-Chr11 20074086 20077409 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g01728 1 661 GRAS Transcription Factor Family AT1G63100 55.731 0.0 684
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Seca11g01728 GRAS 1.1e-125 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g01728 - - lang:109333178 953.355