Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g01723 ATGGGAAAGGCGTCAAGGTGGTTTCGGGGCCTTCTTGGTATGAGAAAATCAGAGTGTGACTCTGCTCGGAAACCACCGAAAGAGAAACGACGATGGAGCTTCGTCAAATCTTACAGAGAAGAAGAACACCGAACAGAAATAGAACACAAAAACCATGTTATCGATAACGCTACGGTCACCTTCACACCAGAACGCGTGGACAACAAGCAAGCCATCGCAGTCGCTGCAGCCACTGCTGCGGCAGCAGAGGCTGCCGTCGCTGCTGCTCAAGCGGCTGCCGCCGTTGTCAAACTCACAAGCACCAACACCGGAATCAGGATCCGTCAAGAATGGGCGGCCGTTAAGATCCAAGCCGCATTTCGAGGCTGTTTGGCAAGGAAAGCACTGCGAGCATTGAAAGGGCTGGTGAAACTCCAAGCAATGGTGAGAGGTCACATTGAGAGGAAGAGAACAGCAGAGTGGCTGAGAAAAATGCAATCAACACTGTTACGAGCACAGGCACGAGCTAGTGCAGTGCGGAACTTGCAGACCTCATATTCCAGTGCAAAGTCATCTACGTGCCATGACCATTCACAGGGTCCAGCAACACCAGAAAAATTTGAAAGCCCTGTCAGATCTAAGAGCATGAAATATGAGCAGTCACCTTTACTCAAGAGAAATTGCTCCAAATCCTGTGTCCTGACCAATGGAAATCAAGAGAGTCAGTTAGATGAACAATCATGGAATAAAATAAGATCATTGACAAGAACTTATAGCCGGAATGATGAAAAAAGTGATAGGATTCTTGAAATTGATTCTGGAAAACCACACTTCACATCAAAACGGAGAAGCCTCTTTTACTCCACCAGTGATGCTTTCGGTTCTGATCATTACTATAGCAATAGTTTGACCACCACCACAAAGGAGTCAACATCTGGTCAGAGTCTATCTTGTGAAGTTCAGTCTAACAGCCCACTAAAATTCAAGGAGGTTGAGGAGAGCCCCTTCTGCACTGCCGACAATAGTCCTCAATATTTATCTGCCACCTCAAAAGATGATGGCTCCAAAAGAAGTCCTTTTACTCCTACTAGGAGTGATGGTTCAAGAAGCTACCTTCGTGGTTATGACTACCCAAGTTACATGGCATACACCGAGTCATCAAAGGCAAAGGTCAGATCTCTCAGTGCCCCAAAACAGAGGCCACAGTATGAGAAGTCTGGTTCATCTAATAGGTACTCACTTAATGGATTTGACGGGTCAAGATTTGCCACACAGAAGACATCTGCTACATTGCATGCAAGCTTCACCAGCAAAGCTTATCCAGGTTCTGGTCGTTTGGACAAGCTTGGAATGCCTGTGGGGTATAGATACTGA 1353 0.4649 MGKASRWFRGLLGMRKSECDSARKPPKEKRRWSFVKSYREEEHRTEIEHKNHVIDNATVTFTPERVDNKQAIAVAAATAAAAEAAVAAAQAAAAVVKLTSTNTGIRIRQEWAAVKIQAAFRGCLARKALRALKGLVKLQAMVRGHIERKRTAEWLRKMQSTLLRAQARASAVRNLQTSYSSAKSSTCHDHSQGPATPEKFESPVRSKSMKYEQSPLLKRNCSKSCVLTNGNQESQLDEQSWNKIRSLTRTYSRNDEKSDRILEIDSGKPHFTSKRRSLFYSTSDAFGSDHYYSNSLTTTTKESTSGQSLSCEVQSNSPLKFKEVEESPFCTADNSPQYLSATSKDDGSKRSPFTPTRSDGSRSYLRGYDYPSYMAYTESSKAKVRSLSAPKQRPQYEKSGSSNRYSLNGFDGSRFATQKTSATLHASFTSKAYPGSGRLDKLGMPVGYRY. 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g01723 450 PANTHER IQ-DOMAIN 5-RELATED 1 408 - -
Seca11g01723 450 ProSiteProfiles IQ motif profile. 133 160 IPR000048 GO:0005515
Seca11g01723 450 Pfam IQ calmodulin-binding motif 136 150 IPR000048 GO:0005515
Seca11g01723 450 Pfam IQ calmodulin-binding motif 111 130 IPR000048 GO:0005515
Seca11g01723 450 Gene3D - 107 161 - -
Seca11g01723 450 MobiDBLite consensus disorder prediction 332 361 - -
Seca11g01723 450 MobiDBLite consensus disorder prediction 384 404 - -
Seca11g01723 450 Pfam Protein of unknown function (DUF4005) 335 408 IPR025064 -
Seca11g01723 450 ProSiteProfiles IQ motif profile. 109 137 IPR000048 GO:0005515
Seca11g01723 450 SMART iq_5 108 130 IPR000048 GO:0005515
Seca11g01723 450 SMART iq_5 131 152 IPR000048 GO:0005515
Seca11g01723 450 MobiDBLite consensus disorder prediction 181 213 - -
Seca11g01723 450 MobiDBLite consensus disorder prediction 332 364 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g01723 Seca-Chr11 20016132 20020424 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g01723 110 450 IQD Protein Family AT4G23060 45.480 2.05e-65 216
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g01723 - - gmx:100793587 511.916