Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g01717 ATGGAAGACGAAATGAACAGGGAACTCGAGCTTCTACCATCATCCCGCTCCGATTCCTCGCTGCTGCGTCTGCGATCAACGACAACGACGACGGAGGGAGGCGCTCCGTCGTTAGACCTGCAACTATCGATCAGCGTAGGTCCACCAGCGGTGCTGATGTGCGAGGGAGTGGAGGCGCTGAAGTGGCAAGCGGCGGAGCAAATCCGGCTGGCGGCGATGGAAAAGGCGTATGCAGAGAGAGTGAGAGAGCTGACAAGGAGAGAGATGGAAATGGCTCAGTCTGAGTTCGCACGTGCGAGACAAATGTGGGAGCGTGCGAGGGAAGAAGTTGAAAGAGCTGAGAGGATCAAAGAAAGAGCCACAAGACAGGTGGATTCTACGTGCATGGAGATCACTTGCCATTCCTGCAGGCAAAGGTTCAGGCCTGCTTCTGCTTAA 438 0.5548 MEDEMNRELELLPSSRSDSSLLRLRSTTTTTEGGAPSLDLQLSISVGPPAVLMCEGVEALKWQAAEQIRLAAMEKAYAERVRELTRREMEMAQSEFARARQMWERAREEVERAERIKERATRQVDSTCMEITCHSCRQRFRPASA. 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g01717 145 Coils Coil 82 123 - -
Seca11g01717 145 PANTHER OS03G0310200 PROTEIN 27 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g01717 Seca-Chr11 19911477 19911914 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g01717 64 141 C2H2 Transcription Factor Family AT2G01940 40.506 2.80e-15 69.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g01717 - - var:108340281 197.593