Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g01707 ATGGCCACTACGACCACCAGTCTCGGCGGCGACACCGGCGGAGACGACCGTGTCCTCGCGACGGCTCAGCAGATCTTGAAGAGCCTGAGAACTCCGAAAGAGGATCGCGAAGACATGCTCTTGATCTTCTCCACCTTCGATAACCGCCTCTCCGGCATCTCTGACCTCATCAACGGCGAGGATTCCAAGTCCTCCACCGACGAAGACCTCGACCGCTTCGAAGCCGCCGAGAAAGTCATCCTCGTCGACGCTTCCCTCTCCGGTGAACCTTCCCGCCAATCCATCTCACTCTTTGATCCTCCCAACGACCCTGTCGAGTACTTCTCCGCCGTCGACGAGATCATTCAGTGGATGGAGCAATTATCGATAGCGTCCTCTGCCGGGAAACACGGCCAGACCATCGCGGACCGTGCTGAGAACGCGATCCAGCTCGCTATGTCGAGGCTCGAGGACGAGCTTCGCCACGTTCTGATTTGCAACACCGTCCCTCCCGATGCCGTGAGCCGCTACGGTTCGACCCGGAGGGGTTCCATCTCGTTCGGTTCGCACGACGGCGCGATCGACGAGAATCTCGAGAGTTTCGGTGATGTGAGCGATCGCGGTTCTTATCGGTTCCACGAGCGCGGTGCAAGCCTGGGAGACGATTTGTTCATCGATTTGGTTCGTCCTGAAGCGATGCTGAACCTCAAAGAGATCATCGATCGTATGGTTAGGTCTGGTTACGAAAGGGAGTGCCTTCAGGTTTATAGCAGTGTCCGTCGTGACGCTTTGGATGAGTGTTTGCTTATTCTAGGTGTTGAGAAGTTGAGTATTGAAGAGGTTCAGAAGGTTGAGTGGAAGAGTTTGGATGAGAAAATGAAAAATTGGGTGCAAGCAGTTAAGGTTATTGTTGGGGTTCTGTTGACTGGGGAGAAGAGGTTGTGTGATAATTTGTTTGGTGAATTGGATGAGTTGAAGGAGATTTGTTTCAATGAGACTGCGAAAGGGTGTGTTATGCAGTTGTTGAATTTTGGTGAGGCCATTGCCATTTGTAAGAGGTCACCAGAGAAGTTGTTTAAGATATTGGATATGTATGAGGCTTTGAGGGATGCTTTGCCTGATTTGGAGGATATGGTTTCTGATGGGTTTGTGATAACTGAGGCCAAGGGAGTGCTGAGGGGACTTGGTGAGGCTGCAAAAGGGACATTTGCTGAGTTTGAGAATTGTATTCGAAATGAGACTTCCAAAAAGCCAGTCATCACTGGGGATGTTCATCCTTTGCTTCGTTATGTCATGAATTACCTCAAGTTGCTTGTGGATTATGGTGACCCTATGGATTCCCTTTTGGAAATCAGTGAAGAGGATCTTTACCATTTTCAAAATGATTTGGGTGGTGATGGTTCGCAGTTAGAGGCTATGTCCCCCTTAGGACGTCAAATACTGTTGCTAATGTCTGAGCTTGAGTACAATCTTCAGGAAAAATCTAAGCTTTATGAAGACAGTGCAATGCAGCAGGTGTTTTTGATGAACAATCTCTATTACCTAGTGCGGAAAGTGAAAGACTCAGATCTTAGAACAGTCTTGGGGGATGATTGGATTCGTAAACGCCGCGGTCAGGTACGCCAGTATGCAACAGGCTATCTCAGAGCCTCTTGGAGCAAGGCCTTGGCTTGTTTGAAGGATGAAGGGATTGGAGGGAGCTCTAGTAATGCATCAAAGATGGCTTTGAAGGAGAGGTTCAAGAGTTTTAATGCATGTTTTGAAGAAATATACAGGGTTCAGACAGCTTGGAAGGTACCAGATGATCAGCTTAGGGAAGAGATGCGAATATCTATATCAGAGAAGGTGATCCCTGCATACCGCTCGTTTGTGGGGAGGTTTAGGAGTCAGCTAGAAGGAAGGCATTTGGGGAAATACATTAAGTATACACCAGAGGATCTAGAGACCTATTTATTAGATTTATTTGAAGGATCCCCTGCTGTATTGCATCACATAAGGAGAAAGAGTACATAG 1992 0.4834 MATTTTSLGGDTGGDDRVLATAQQILKSLRTPKEDREDMLLIFSTFDNRLSGISDLINGEDSKSSTDEDLDRFEAAEKVILVDASLSGEPSRQSISLFDPPNDPVEYFSAVDEIIQWMEQLSIASSAGKHGQTIADRAENAIQLAMSRLEDELRHVLICNTVPPDAVSRYGSTRRGSISFGSHDGAIDENLESFGDVSDRGSYRFHERGASLGDDLFIDLVRPEAMLNLKEIIDRMVRSGYERECLQVYSSVRRDALDECLLILGVEKLSIEEVQKVEWKSLDEKMKNWVQAVKVIVGVLLTGEKRLCDNLFGELDELKEICFNETAKGCVMQLLNFGEAIAICKRSPEKLFKILDMYEALRDALPDLEDMVSDGFVITEAKGVLRGLGEAAKGTFAEFENCIRNETSKKPVITGDVHPLLRYVMNYLKLLVDYGDPMDSLLEISEEDLYHFQNDLGGDGSQLEAMSPLGRQILLLMSELEYNLQEKSKLYEDSAMQQVFLMNNLYYLVRKVKDSDLRTVLGDDWIRKRRGQVRQYATGYLRASWSKALACLKDEGIGGSSSNASKMALKERFKSFNACFEEIYRVQTAWKVPDDQLREEMRISISEKVIPAYRSFVGRFRSQLEGRHLGKYIKYTPEDLETYLLDLFEGSPAVLHHIRRKST. 664
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g01707 663 FunFam Exocyst subunit Exo70 family protein 91 656 - -
Seca11g01707 663 Pfam Exo70 exocyst complex subunit 287 645 IPR046364 GO:0000145|GO:0005546|GO:0006887
Seca11g01707 663 PANTHER EXOCYST COMPLEX PROTEIN EXO70 70 650 IPR004140 GO:0000145|GO:0006887
Seca11g01707 663 SUPERFAMILY Cullin repeat-like 95 649 IPR016159 -
Seca11g01707 663 Gene3D Exocyst complex component Exo70 91 655 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g01707 Seca-Chr11 19660656 19662647 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g01707 16 662 EXO70 exocyst subunit family AT5G50380 60.296 0.0 780
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g01707 K07195 - gmx:100809716 1141.72