Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g01697 ATGGTTTCAACGAGACGCAGTGGATCTCTTTCTTCCAACAAAAGATCTTCTTCGTCCTCTGACGATAAGTCTCCTTCACCTAAGCGTCACAAGGTAGACAATGGCGGTTCGTCGGAGAAACCGTCGCCGGCGTCGGAAAATTCCAAGGAATTCTGTACTCCAGAGCCCGTGCCTGATCCCGGAGAATGTGGCTCCGGCGATCCTCCGATCGCCGGAGTAGATGCCACTGATGCTGTGAGTCCTCCCAAGGGTGATGCTGATGCAAAGCCGGCTGTGCCTGTGACGACGCCGGTTGCTGATGCCACATGTCGGTCGTTCTCTTCGTGGGCTATGTATCAGGCACAAAATACGAAATATGAAGCTTCAGCTGCTCCCTGGTGCAGGTTCTTGTCGCAGACTGCACAGAATCCAAATGTGGCTGTTCGCACACCAAATTTCACGATTGGTTCTAGTAGAAATTGCAATTTTCCATTGAAGGATCAAACTATAAGTGGAAATTTATGCAAGATAAGGCATACCCAGCGCGGGGAAAGTTCTGTAGCTGTGCTAGATAGTACGGGTAGCAAAGGATCTGTGCTAGTAAATGGGACACTCATCAAGAAGAATAACAGCTGTGTGCTTAACTCGGGTGATGAGGTGGTTTTTGGTGTGCTCGGAAATTATTCATATATTTTCCAGCAACTGAATAATGAGGTTGTGGTCAGGGGTGCAGAAGTTCAAAGTAGTGTTAAGAAATATCTGCAGGTCGAAAGGAGAAGTGGAGACTCTTCAGCTGTGGCTGGGGCCTCTATTTTGGCTTCTCTTTCTAACCTCAGACAGGACCTTCCAAAATGGAAATCTCCATCTAAGACCTTAGTTCCAAATGTGCAGAGTGATAAAGCAGCTGATATTGGAGCAAGCAACAAGAGTTCAATGATGGATTGTGATCTGGAGGCTGGCACGAAGGCAGGCAATGTAAAACTCTCTGGGGTGTTGGAAGAAAGAAATGGGATGTGGGATATGCAAGCCGCATTGACTTCGGGTACATCTGTGCGCTGTGCAGTGTTTAAGGAAGATGTTCATGATGCAATACTGGATGGAAAAGAAATGGATGTGTCTTTTGACAACTTCCCATACTATTTGAGTGAGAATACAAAAAATGTCCTGGTGGCAGCTTGCTTTATACACCTCAAACATAAAAAACATGAAAAGTACACTGCAGATCTCACTACCATAAACCCTCGTATTCTGCTATCAGGACCTGCAGGGTCAGAAATATATCAGGAGATGTTGGTAACAGCACTTGCAAATTACTTTGGAGCTAAGTTGCTCATATTTGATAGCTACATACTTTTGGGTGGTTTATATTCCAAGGAAGTTGAGCTACTCAAAGATGGATTTAATGCTGAAAAATCCTGCAGCCGCACTAAACAAAGTCCTACAGTCCCAGACATGGCTAGGAGCATGGACCCATTAGCTAATGAAACAGAGACGCCTAGCTCTACTTTAAATGGTCTTGAGTCTCAACCTAAGTTGGATAATGATACTGATAACATACCATCCACCTCTGGGACAGCTAAAAATTGCTCGTTCAAATTAGGTGATAGAGTGAAATTTAACTCTTCATCTTCTTGTGGCTTGCATCAGACATCTTCAAGGGGCCCACCTAATGGTAGTCGGGGGAAGGTTGTCTTACTATTTGATGATAATCCCTTGTCTAAAATTGGTGTGAGATTTGATAAACTCATACCTGATGGAGTTGATCTGGGAGGTGCTTGTGAGGGAGGACAAGGATTTTTCTGCAATGTCACTGATCTTCGATTGGAAAACAGTGGTGTGGAAGAACTGGACAAATCACTTATTAATGCACTGTTTGAGGTTGTTTGCAGTGAGAGCAGAAGTACACCATTCATTTTGTTCATGAAAGATGCTGAGAAGTCTATAGTTGGAAATGGAGATCCATCTTCATTTAAAAGTAGGCTTGAAAACCTTCCAGACAATGTGGTGGTAATAGGTTCACACACTCATACTGACAGTCGCAAGGAGAAGTCACATCCTGGTGGTTTGCTTTTTACAAAATTTGGTGGAAATCAGACTGCCCTTCTTGACTTGGCGTTCCCAGATAGTTTTGGACGATTGCATGACAGGGGGAAGGAAGCCCAAAAGCCAAACAAAACGTTGACTAAGCTTTTCCCAAATAAAATTACAATTCACATGCCACAGGATGAGGCACTTCTACCATCTTGGAAGCAGCAACTGGATCGAGATGTTGAGACTCTTAAAATCAAAGGAAATTTACATCAATTGAGCACGGTTTTGGGTCGTTGTGGAATGGAATGTAAAGGACTGGAGACCTTGTGCATTAAGGATCAGACACTCACAAATGAAAATGCAGAGAAGATAGTTGGTTGGGCTGTAAGCCACCACCTCATGCAGAACTCTGAAGCTGATCCTAATTCAAAGCTTGTATTATCGTGTGAGAGCATCGAGTATGGAATTGGGATCTTGCAGTCTATCCAGAATGAGTCCAAGAACCTGAAGAAGTCTCTTAAGGATGTTGTAACAGAAAATGAGTTTGAAAAGAGGCTTTTGGGTGATGTGATTCCACCAAGTGACATTGATGTTACTTTTGATGATATTGGTGCTCTTGAAAATGTCAAGGATACACTGAAGGAGTTGGTGATGCTTCCTTTACAGAGGCCTGAGCTTTTTTGCAAGGGGCAACTAACCAAGCCTTGCAAGGGTATCCTATTATTTGGTCCCCCTGGAACAGGTAAAACAATGCTTGCAAAGGCAGTTGCTACTGAAGCTGGTGCAAACTTCATCAACATTTCTATGTCAAGCATTACATCTAAGTGGTTTGGTGAGGGTGAGAAATACGTCAAAGCTGTTTTTTCTCTGGCGAGTAAAATTGCTCCTAGTGTTATATTTGTTGACGAAGTTGACAGCATGCTGGGTCGGAGGGAAAATCCAGGGGAGCATGAGGCCATGCGAAAGATGAAAAATGAATTTATGGTGAACTGGGATGGCTTACGGACAAAGGATACTGAGCGAGTTCTTGTGCTTGCAGTCACTAACAGGCCTTTTGACCTAGATGAGGCTGTCATAAGGAGGCTGCCACGAAGATTGATGGTAAATTTGCCAGATGCTCCAAATAGAGCGAAAATATTGAAAGTTATTCTGGCAAAAGAGGAATTGTCTCCTGATGTTGATTTGAATGCAGTTGCAAATATGACTGATGGATATTCTGGAAGTGATCTTAAGAACTTGTGTGTAACTGCTGCACATCGTCCAATTAAAGAGATATTAGAAAAGGAAAAAAAGGAACGTTCTGCTGCTACAGCAGAAGGTCGACCTCCCCCAGCATTATGTGGCAGTGGGGACGTTCGATCTTTAAACATGGAAGACTTTAAATATGCACATAAACAGGTATCTGCAAGTGTTTCATCTGAATCAGTAAATATGACTGAGCTTTTACAATGGAATGAACTGTATGGCGAGGGTGGTTCAAGAATAAAGAAAGCACTCAGCTATTTCATGTGA 3522 0.4324 MVSTRRSGSLSSNKRSSSSSDDKSPSPKRHKVDNGGSSEKPSPASENSKEFCTPEPVPDPGECGSGDPPIAGVDATDAVSPPKGDADAKPAVPVTTPVADATCRSFSSWAMYQAQNTKYEASAAPWCRFLSQTAQNPNVAVRTPNFTIGSSRNCNFPLKDQTISGNLCKIRHTQRGESSVAVLDSTGSKGSVLVNGTLIKKNNSCVLNSGDEVVFGVLGNYSYIFQQLNNEVVVRGAEVQSSVKKYLQVERRSGDSSAVAGASILASLSNLRQDLPKWKSPSKTLVPNVQSDKAADIGASNKSSMMDCDLEAGTKAGNVKLSGVLEERNGMWDMQAALTSGTSVRCAVFKEDVHDAILDGKEMDVSFDNFPYYLSENTKNVLVAACFIHLKHKKHEKYTADLTTINPRILLSGPAGSEIYQEMLVTALANYFGAKLLIFDSYILLGGLYSKEVELLKDGFNAEKSCSRTKQSPTVPDMARSMDPLANETETPSSTLNGLESQPKLDNDTDNIPSTSGTAKNCSFKLGDRVKFNSSSSCGLHQTSSRGPPNGSRGKVVLLFDDNPLSKIGVRFDKLIPDGVDLGGACEGGQGFFCNVTDLRLENSGVEELDKSLINALFEVVCSESRSTPFILFMKDAEKSIVGNGDPSSFKSRLENLPDNVVVIGSHTHTDSRKEKSHPGGLLFTKFGGNQTALLDLAFPDSFGRLHDRGKEAQKPNKTLTKLFPNKITIHMPQDEALLPSWKQQLDRDVETLKIKGNLHQLSTVLGRCGMECKGLETLCIKDQTLTNENAEKIVGWAVSHHLMQNSEADPNSKLVLSCESIEYGIGILQSIQNESKNLKKSLKDVVTENEFEKRLLGDVIPPSDIDVTFDDIGALENVKDTLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVIFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDTERVLVLAVTNRPFDLDEAVIRRLPRRLMVNLPDAPNRAKILKVILAKEELSPDVDLNAVANMTDGYSGSDLKNLCVTAAHRPIKEILEKEKKERSAATAEGRPPPALCGSGDVRSLNMEDFKYAHKQVSASVSSESVNMTELLQWNELYGEGGSRIKKALSYFM. 1174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g01697 1173 Coils Coil 829 849 - -
Seca11g01697 1173 CDD FHA 128 226 - -
Seca11g01697 1173 MobiDBLite consensus disorder prediction 486 516 - -
Seca11g01697 1173 MobiDBLite consensus disorder prediction 466 516 - -
Seca11g01697 1173 MobiDBLite consensus disorder prediction 1 20 - -
Seca11g01697 1173 Pfam FHA domain 147 216 IPR000253 GO:0005515
Seca11g01697 1173 Gene3D - 1041 1135 - -
Seca11g01697 1173 Pfam AAA+ lid domain 1062 1097 IPR041569 -
Seca11g01697 1173 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 349 1172 - -
Seca11g01697 1173 Gene3D - 125 233 - -
Seca11g01697 1173 SUPERFAMILY SMAD/FHA domain 124 220 IPR008984 GO:0005515
Seca11g01697 1173 MobiDBLite consensus disorder prediction 21 36 - -
Seca11g01697 1173 CDD RecA-like_ATAD1 872 1038 - -
Seca11g01697 1173 SMART AAA_5 905 1042 IPR003593 GO:0016887
Seca11g01697 1173 Pfam ATPase family associated with various cellular activities (AAA) 909 1038 IPR003959 GO:0005524|GO:0016887
Seca11g01697 1173 ProSiteProfiles Forkhead-associated (FHA) domain profile. 146 199 IPR000253 GO:0005515
Seca11g01697 1173 MobiDBLite consensus disorder prediction 1096 1121 - -
Seca11g01697 1173 FunFam p-loop nucleoside triphosphate hydrolase superfamily protein 867 1043 - -
Seca11g01697 1173 Gene3D - 867 1148 IPR027417 -
Seca11g01697 1173 MobiDBLite consensus disorder prediction 1 92 - -
Seca11g01697 1173 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 867 1148 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g01697 Seca-Chr11 19570306 19582731 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g01697 868 1100 Calmodulin-binding Proteins AT3G56690 40.928 1.71e-40 160
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g01697 - - gmx:100816731 1888.62