Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g01665 ATGATGAAGGTCACAACAAATTTTTCAAGTTTCGTGATCTTAATACTTTGTTTTCAAGAATTCGTCCACGTTTCTTCGTCGCCTCTCGTAAACGGAAACCAGGTTTATGAGGAATCGTCTGGTGAAAGAAATCTTAAGCAAGAACAAGAGCATGGTCATGAAGTGCATTGCTCTAGAGAGAGAAGTAGGGCAGCTTGGAAAATAATAGAGGAGTATTTGATACCGTTTGTGGAAAAAGAAAACTATCAGCTTTCAAGAAGGTGCAGACTTCACCCTGAGAATGATATGTTCAGGGATCAGGAAGAGCATAAAATTTCCATAGACAGACATGAATGGCGGTGTGGATATTGTAAGAAAAGCTTCCGTGAAGAAAAATTTCTCGATCAGCATTTTGATAACAGACACCACAATCTTCTGAATCTAAGTCATGGTAAGTGCTTGGCTGATTTATGCGGGGCATTGCATTGTGATGCTGTGATGAATTCGAAATCCTCCAGAAGCAAGTGTAACCCAGCAGCTGCTGCAAGAAACCGTCACCTATGTGAGAGTCTTGCTGATGGTTGTTTTCCTATAAGCGAGGGTCCATCAGCAGGCCGTCTTCATGGTATACTTATATTTTCTTTTACAGCCAACTCCTTATTGTGCCACTATGATGTTTCTCGTCACTCCCTTCTTTTAAAAGAAATTCTTTATTTTTTATATTTTTCTTTGTTGATTAATTTCTTATGGTGA 732 0.3921 MMKVTTNFSSFVILILCFQEFVHVSSSPLVNGNQVYEESSGERNLKQEQEHGHEVHCSRERSRAAWKIIEEYLIPFVEKENYQLSRRCRLHPENDMFRDQEEHKISIDRHEWRCGYCKKSFREEKFLDQHFDNRHHNLLNLSHGKCLADLCGALHCDAVMNSKSSRSKCNPAAAARNRHLCESLADGCFPISEGPSAGRLHGILIFSFTANSLLCHYDVSRHSLLLKEILYFLYFSLLINFLW. 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g01665 243 ProSiteProfiles Zinc finger C2H2 type domain profile. 112 135 IPR013087 -
Seca11g01665 243 PANTHER ZINC FINGER PROTEIN-RELATED 4 209 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g01665 Seca-Chr11 19170730 19175754 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g01665 44 206 C2H2 Transcription Factor Family AT5G40710 66.258 1.35e-81 242
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Seca11g01665 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g01665 - - lang:109362398 354.755