Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g01653 ATGCAAATGGGTGCCCAAACTATACCCATCGACTTCCACAACACCCGAGTCTTACCCGATTACGATGTATTCATACACACTTCCGATGGAACACGCATTCCCGCACACGCTGGCATTCTGGCTTCGGTGTCGCCGGTTTTGGAAAACTTGATAGATCGACCGCGGAAGCATCGGAGTTCCGAAAGAATAATCCAAATCCACGGCGTTCCATGCGACGCCGTTTCAGCCTTCGTTGGCTTCCTCTACACCTCGAGGTGCACAGAGGATGAAATGGACAAGTACGGGATGCACCTTCTTGCACTCTCGCATGTGTACCTGGTCCCTCAGCTGAAACAGAGATGCATCAAAGGCTTATCACAGCGCTTGACCACAGAGAACGTGGTGGACGTGCTTCAACTCGCAAGGCTCTGCGACGCACCGGATCTCCACCTCCGCTGCATGAACCTCCTCACCAATCACTTCAAGGCCGTTGAAAAAACCGAAGGATGGAAGTTCCTTACCAAACACGATCCCTGGCTCGAACTCGATATCCTTCGCTTCATCGACGAACGCGAAACGAGGAAAGTGAAATCGAGGAGGCATAGGGAAGAACAGGGGCTGTATTCGCAATTGAGTGAGGCGATGGAGTGTTTGGAGCACATTTGCACGGAGGGTTGCACAGAGGTTGGACCTTACCATGTGGAGGTTAACAGAGAGAGGAAACCGTGTAGTAGATTCTCCACGTGTCAAGGTCTTCAGCAACTGATTCGTCATTTCGCCACGTGTAAGAGAAGGATGAATGGAGGGTGCTTGAGGTGCAAGAGAATGTGGCAGTTATTCAGACTCCATTCCTATATTTGTCAACAAACTGATTCTTCTTGCAATGTTCCTCTTTGCAGGCAATTTCAATTGAGAATGCAGCAAGAGAAAATGAAAGATGATTCAAGGTGGAAACTACTAGCGAAGAAGGTGGCCTCAGCCAGAGTCATGTCTTCCTTGTCTCTGCCAAAGAGGAAACGGGATGAAGAAACAAGAGTGGCGATAAACAATCCTGGGATTAGAAGTTTTAATTTACAATGA 1059 0.4882 MQMGAQTIPIDFHNTRVLPDYDVFIHTSDGTRIPAHAGILASVSPVLENLIDRPRKHRSSERIIQIHGVPCDAVSAFVGFLYTSRCTEDEMDKYGMHLLALSHVYLVPQLKQRCIKGLSQRLTTENVVDVLQLARLCDAPDLHLRCMNLLTNHFKAVEKTEGWKFLTKHDPWLELDILRFIDERETRKVKSRRHREEQGLYSQLSEAMECLEHICTEGCTEVGPYHVEVNRERKPCSRFSTCQGLQQLIRHFATCKRRMNGGCLRCKRMWQLFRLHSYICQQTDSSCNVPLCRQFQLRMQQEKMKDDSRWKLLAKKVASARVMSSLSLPKRKRDEETRVAINNPGIRSFNLQ. 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g01653 352 SUPERFAMILY POZ domain 21 120 IPR011333 -
Seca11g01653 352 SUPERFAMILY TAZ domain 196 296 IPR035898 -
Seca11g01653 352 SMART BTB_4 21 122 IPR000210 GO:0005515
Seca11g01653 352 FunFam BTB/POZ and TAZ domain-containing protein 2 194 321 - -
Seca11g01653 352 Pfam TAZ zinc finger 205 292 IPR000197 -
Seca11g01653 352 CDD BACK 123 170 - -
Seca11g01653 352 Gene3D TAZ domain 196 321 IPR035898 -
Seca11g01653 352 Gene3D Potassium Channel Kv1.1; Chain A 12 122 IPR011333 -
Seca11g01653 352 ProSiteProfiles BTB domain profile. 21 90 IPR000210 GO:0005515
Seca11g01653 352 FunFam BTB/POZ and TAZ domain-containing protein 2 123 193 - -
Seca11g01653 352 Gene3D - 123 195 - -
Seca11g01653 352 SMART TAZ_2 198 293 IPR000197 -
Seca11g01653 352 PANTHER BTB/POZ AND TAZ DOMAIN-CONTAINING PROTEIN 3-RELATED 20 335 IPR044513 -
Seca11g01653 352 Pfam BTB/POZ domain 22 120 IPR000210 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g01653 Seca-Chr11 18918708 18922662 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TAZ Seca11g01653 BTB 8.7e-13 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g01653 - - cam:101496955 619.387