Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g01644 ATGGCTTTATCCCCTCATAAATCCCACCTCTTAATCTTTCCATTCTTCTTCTTGCTCATTCATGCCAAACTAGACCTCCACCCTTCAGACCTCAAAGCTCTCACAACTGTCCTAAAACACATTGGACTGGGAGTCAACGGTCAACTCCACCCATGTAACACAGAGGGTGTGTTCTGTGAGAGGAGGCTCTCCAACAACGAGAGCTATGTTCTAAGGGTCACCAGGCTCATCTTCAACTCCAAGAACCTCAATGGGGTTCTCTCCCCTGCAATTGGGAACCTCTCCGAGCTCAAAGAACTCTCTTTTTCCAACAACCAAATCGTTGACCAAATCCCCTTCCATATCGTTGACTGCAGGAAGCTCGAAATCCTAGACCTCAGAAACAACCAATTATCAGGGAATGTTCCACCTGAGCTTTCTTCTCTCATTCGCCTTAGAATCCTTGATATCTCTTCCAACAAACTTTCTGGAAACTTAAACTTCTTGAAGTATTTTCCCAACTTGGAAAGCCTCTCTGTGGCTGAAAATCTCTTCACAGGGAGAATTCCATCATCTATTCGTTCCTTTCGCAATCTTAGACACTTCAACTATTCCGGGAACCGTTTCCTTGAAGGCTCTGTGCCATTGGTGAGGCTAGAAGGGTCAGGGTCAGGGTCAGCATCAGAATCAGATGTAATCCCCAAAAGGTTCATCCTTTCTGAGACTCCAGCTGAAAGAATGAAAAGAAACACAGCTCCTGCACCTGCCCTGAAACCCAGTAAGAGTAATGGCCCTGCTCAAGCTCCTGCTCCAACAAGAGCAACCCACAAGCACAAGCATAAATCGAGCAAGAGGAAACTTGCTGGTTGGATTGTTGGTTTTGTAGCTGGGGCACTAGGTGGGATCTTATGTGGGTTAATATTTTCTTTGCTGTTCAAGCTGGCCATGACTGTTATCAAAGGGGGTAGGAAGAGCTCAGGGCCTGCAATTTTCAGTCCTTTGATTAAGAGAGCAGAGGACTTGGCTTTCTTGGAGAAAGAAGATGGACTAGCTTCATTGGAGATCATTGGAAGTGGTGGCTGTGGAGAAGTTTACAAGGCTGAATTACCAGGAAGCAATGGCAAGATGATTGCTATAAAGAAGATTGCTCAACAACTTCAGAGGGATGCAGCAGAATTGGCTGAAGAAGCCAGCAAGCTTTTGAACAAAAAGATGCGTCAAATTCGATCAGAGATCAACACAGTTGGTCAAATTCGACACCGCAACCTCCTACCCTTGCTGGCTCATATGTCCAGGCCTGATTGCCACTATCTTGTCTATGAATATATGAAGAATGGAAGTCTGCAAGATGTGTTGAATCAAGTTCAAGAGGGTAGAAGGGAATTAGATTGGTTGTCACGTCACAAAATTGCACTTGGAGTAGCATCTGGCCTTGAATACCTTCACATGCATCATAGCCCACGTATTATTCATAGAGATCTCAAGCCAGCAAACATTCTTCTTGATGATGATATGGAAGCTCGGATTGCAGATTTTGGGCTTGCTAAAGCAATGCCAGATACTGTGACACATGTGTCAACTTCAAATTTGGCTGGCACTGTGGGATATATAGCACCAGAGTATCACCAGATACTCAAGTTCACTGATAAGTGTGACATATACAGCTATGGTGTTATGCTCGGTGTCATGGTCATAGGAAAGCTTCCTTCTGATGACTTTTTCCTGCAAACTGACGAAATGAGTTTGGTCAAGTGGATGAGAAATGTGATGGCGTCAGAAAATCCCAAGCGAGCAATTGATACGAAGCTCATAGGCAATGGATACGAGGAACAAATGCTTCTGGTTTTGAGGATTGCCTGCTTCTGTACTTTAGATGATCCAAAGGAAAGGCCTAATAGTAAGGATGTTAGGTGCATGTTGGCCCAAATCAACCACTGA 1917 0.4455 MALSPHKSHLLIFPFFFLLIHAKLDLHPSDLKALTTVLKHIGLGVNGQLHPCNTEGVFCERRLSNNESYVLRVTRLIFNSKNLNGVLSPAIGNLSELKELSFSNNQIVDQIPFHIVDCRKLEILDLRNNQLSGNVPPELSSLIRLRILDISSNKLSGNLNFLKYFPNLESLSVAENLFTGRIPSSIRSFRNLRHFNYSGNRFLEGSVPLVRLEGSGSGSASESDVIPKRFILSETPAERMKRNTAPAPALKPSKSNGPAQAPAPTRATHKHKHKSSKRKLAGWIVGFVAGALGGILCGLIFSLLFKLAMTVIKGGRKSSGPAIFSPLIKRAEDLAFLEKEDGLASLEIIGSGGCGEVYKAELPGSNGKMIAIKKIAQQLQRDAAELAEEASKLLNKKMRQIRSEINTVGQIRHRNLLPLLAHMSRPDCHYLVYEYMKNGSLQDVLNQVQEGRRELDWLSRHKIALGVASGLEYLHMHHSPRIIHRDLKPANILLDDDMEARIADFGLAKAMPDTVTHVSTSNLAGTVGYIAPEYHQILKFTDKCDIYSYGVMLGVMVIGKLPSDDFFLQTDEMSLVKWMRNVMASENPKRAIDTKLIGNGYEEQMLLVLRIACFCTLDDPKERPNSKDVRCMLAQINH. 639
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g01644 638 SMART serkin_6 343 633 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca11g01644 638 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 68 159 - -
Seca11g01644 638 ProSitePatterns Serine/Threonine protein kinases active-site signature. 482 494 IPR008271 GO:0004672|GO:0006468
Seca11g01644 638 Pfam Protein kinase domain 346 602 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca11g01644 638 MobiDBLite consensus disorder prediction 237 275 - -
Seca11g01644 638 Gene3D Phosphorylase Kinase; domain 1 334 435 - -
Seca11g01644 638 ProSiteProfiles Protein kinase domain profile. 343 638 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca11g01644 638 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 55 636 - -
Seca11g01644 638 Gene3D Transferase(Phosphotransferase) domain 1 436 637 - -
Seca11g01644 638 FunFam Leucine-rich repeat receptor-like protein kinase 436 638 - -
Seca11g01644 638 Gene3D Ribonuclease Inhibitor 30 159 IPR032675 -
Seca11g01644 638 Gene3D Ribonuclease Inhibitor 160 217 IPR032675 -
Seca11g01644 638 SUPERFAMILY L domain-like 49 204 - -
Seca11g01644 638 Coils Coil 369 404 - -
Seca11g01644 638 SUPERFAMILY Protein kinase-like (PK-like) 332 634 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g01644 Seca-Chr11 18832708 18834624 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g01644 24 638 Receptor kinase-like Gene Family AT2G31880 63.535 0.0 791
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-2 Seca11g01644 Pkinase 3.2e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g01644 - - qsu:111990511 882.093