Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g01624 ATGCTTATTTCAATATCAAACAATATTGTGTGTAAATGTTCTCTGGGACGAAAGTATGCAGGAGGTAGTTACGGCAAAGTGAAAGAGTTAGCAAGGAATGTTATGGTTCATCTTATGGCTTTCACTGTGAGGGATTACTTCCCTTTGTTGGGTTGGATTGATGTTCTGAGTGGAAAAATTCGCGAATTCAAGGCTACTTTTAGAGCGTTAGATGCTTTATTTGATCAGGCAGTTGCAGAGCATTTGGCAGTGAAGACAGAAAGTGACCATTCCAAAGGGAAAGACTTTGTGGATATCCTCCTCCAACTTCAACAGGATCCCATGCTTACCTTTGAGCTCACAAATATTGACCTCAAAGCACTTCTAACGGACATGTTTGTGGGAGGAACGGATACAACTTCAGCAGCATTAGAATGGGCTATTTCAGAGCTGGTGAGACATCCAATGACATTGAAAAAAGCACAGGAAGAAGTGAGAAAAGTTGTAGGTAACAAATCAGAAGTAGAAGAAGATGATATCAATCAAATGCACTATCTAAAGTGTGTGGTCAAAGAAACTCTAAGGTTACATCCACCTACAACTCTTTTGCCTCCTCGAGAAACAAGATCTAGCGTGAAATTGAAAGGATATGATATTCCTGTGAAAACAATGGTATTTATTAATGTATGGGCAATTCAGAGGAGCCCTGAATTTTGGGAAAGCCCTGAAGAGTTTCTACCAGAGAGATTCGAAAACAATCAAGTTGATTTTCGAGGTCAAGATTCTCAGTTTATTCCATTCGGTTTTGGGAGGAGGGGATGTCCTGGAATGAATTTTGGAATTGCTTCTATTGAGTATGTGCTTACGAATCTTCTTTATTGGTTCGATTGGAAGGTGCAATCATTTCGTGTCATCAGAGAAGAGGAAGTTGAGGAATTGGTGGATAAGCTACGTGAAGCAAGCTCCAATGATGAGTGCGTGAATCTAAGTGACATGCTTATTTCAACCTCAAACAATATTGTTTGTAAATGTGTTCTGGGACGGAAGTATGCAGGAGGTAGTTACGGCAACGTGAAAGAGTTGGCAAGGAATGTTATGGTTCATCTTACGGCTTTCACTGTGAGAGATTACTTCCCTTTGTTGGGTTGGATTGATGTTCTGAGTGGAAAAATTCGCGAATTCAAGGCTACTTTTAGAGCATTAGATGCTTTATGTGATGAGGCAATTGCAGAGCATTTGGCAGTGAAGACAGAAAGTCACCGTTCCAAAAAGAAAGACTTCGTGGATATCCTACTCCAACTTCAACAGGATAGCAAATTTGAGCTCACAAAAACTGACCTCAAAGCACTTCTAACGGTTTCTGTTTTTAACTTTTTTATCACTTTCTTTTTTACTGAAACACATTCACTCCCTGCACTTAAAAGTTAA 1407 0.3966 MLISISNNIVCKCSLGRKYAGGSYGKVKELARNVMVHLMAFTVRDYFPLLGWIDVLSGKIREFKATFRALDALFDQAVAEHLAVKTESDHSKGKDFVDILLQLQQDPMLTFELTNIDLKALLTDMFVGGTDTTSAALEWAISELVRHPMTLKKAQEEVRKVVGNKSEVEEDDINQMHYLKCVVKETLRLHPPTTLLPPRETRSSVKLKGYDIPVKTMVFINVWAIQRSPEFWESPEEFLPERFENNQVDFRGQDSQFIPFGFGRRGCPGMNFGIASIEYVLTNLLYWFDWKVQSFRVIREEEVEELVDKLREASSNDECVNLSDMLISTSNNIVCKCVLGRKYAGGSYGNVKELARNVMVHLTAFTVRDYFPLLGWIDVLSGKIREFKATFRALDALCDEAIAEHLAVKTESHRSKKKDFVDILLQLQQDSKFELTKTDLKALLTVSVFNFFITFFFTETHSLPALKS. 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g01624 468 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 260 269 IPR017972 GO:0005506|GO:0016705
Seca11g01624 468 PRINTS E-class P450 group I signature 117 134 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g01624 468 PRINTS E-class P450 group I signature 180 198 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g01624 468 PRINTS E-class P450 group I signature 267 290 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g01624 468 PRINTS E-class P450 group I signature 137 163 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g01624 468 PRINTS E-class P450 group I signature 221 245 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g01624 468 PRINTS E-class P450 group I signature 257 267 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g01624 468 PRINTS E-class P450 group I signature 5 23 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g01624 468 PANTHER CYTOCHROME P450 71B11-RELATED 1 292 - -
Seca11g01624 468 Pfam Cytochrome P450 294 446 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g01624 468 Pfam Cytochrome P450 4 294 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g01624 468 PRINTS P450 superfamily signature 128 145 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g01624 468 PRINTS P450 superfamily signature 181 192 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g01624 468 PRINTS P450 superfamily signature 258 267 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g01624 468 FunFam Cytochrome P450 83B1 1 293 - -
Seca11g01624 468 SUPERFAMILY Cytochrome P450 4 292 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g01624 468 Coils Coil 151 171 - -
Seca11g01624 468 SUPERFAMILY Cytochrome P450 292 449 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g01624 468 Gene3D Cytochrome P450 295 463 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g01624 468 Gene3D Cytochrome P450 1 294 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g01624 Seca-Chr11 18430514 18439733 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g01624 292 453 Cytochrome P450 AT3G48270 35.366 5.88e-21 93.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g01624 K20617 - gmx:100781909 454.521