Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g01608 ATGATACTATTAAATTCCTTTATAGCTACGGCGGCAAGATCCTTCCTCGCCGCACTGACGGCGAACTCCGATACTCCGGCGGCCACACCAGAGTCCTCACCGTCCCTCGTTCAATTTCTTTCTCAGGAGTTAATAGTGAAGCTTGGCGAGTTATGCGGTTCATCGGTCACCCTGAAGTGTCCATTGCCAAACGGAGACTTGGAAACCTTGATTTCTATCACCAGCGATGAAGATCTGGCCAATATAATTCAGCTATACGATGGAGCTTCTACAACGTTAGCTAGTCCCTTGAAGATCAAAGCCATTCTTTCGCCGCCTAAGTCTCTCAAGAAATTATCTCCTCCTCCATCTTCTTTGTCCTGCTCCTCTAACTCTTCGTCCTCTTCGCCTCACGCCTCCGTTGATTCCCTGACGTATGCGGCACCGCATCGGTTCAACTGCCAGAAATTCTCGCCTGTGCCGCTTGGGTATCCAATTGGAGTCCGTAACGGGGCAGTGAAAGGTTGTTGGTACACGCGGCAATTCAGTGGAAGCCCAAGATACCTTTATCGTGGGTCTCACTGTAATAATTACTGTCACTGA 582 0.4931 MILLNSFIATAARSFLAALTANSDTPAATPESSPSLVQFLSQELIVKLGELCGSSVTLKCPLPNGDLETLISITSDEDLANIIQLYDGASTTLASPLKIKAILSPPKSLKKLSPPPSSLSCSSNSSSSSPHASVDSLTYAAPHRFNCQKFSPVPLGYPIGVRNGAVKGCWYTRQFSGSPRYLYRGSHCNNYCH. 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g01608 193 SUPERFAMILY CAD & PB1 domains 42 112 - -
Seca11g01608 193 PANTHER OS05G0427100 PROTEIN-RELATED 42 141 - -
Seca11g01608 193 MobiDBLite consensus disorder prediction 108 129 - -
Seca11g01608 193 Pfam PB1 domain 42 89 IPR000270 GO:0005515
Seca11g01608 193 MobiDBLite consensus disorder prediction 113 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g01608 Seca-Chr11 18215396 18216755 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g01608 43 105 MAP Kinase Kinase Kinase AT1G04700 42.857 2.15e-06 45.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g01608 - - gmx:100815502 171.785