Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g01604 ATGGAAGATGAGTATCTTCGCACCCCAACAGAAGCAAAGGATTACTATTCTAGATCAATATGGTGGTCAGAAACTGCAAAGGCAGAGAGAAATGACAGAAATGGAGTTAATGGCATCTATTTAGCTGCTGGAAGAGATTACTACAGTTATAACTCCCAAGAAATAGCAACTCCTGAAGTTTCTAATACATATGAAGAACTCAAAGGTTTAACTAATACCAGAAACAGAATTGATGACATCTCGGAGGCTGGTGGTGAAGAAAACGGTGATTATGGCCAGTATTCTAGACAATTATTGTCAACAGAAATTGTGGAAATAGTTGAGGATGGCAAGAGCATAACAAGCAACAAAGATAGAGGAGTTGATGACCTTTATGTTGCCGTTGGAAAAGATGACTTGGATGTAGTGAAATGGGCTCTTGATCATGCAGTTTCTCCTGGTTCCCGGATTTTTCTTGTCCATGTTTCTCCTCCAATCACATTGATTCCTACGCCAGTTGGTAAATTTGAAAGAAGCCAACTGACCCCGCAACAAGTGAGACTATATGTTAATGAAGTGAACAACAAAAGGAAGGATCTTTTGCAGAAGTACATCCATCTTAGTACTGAAGCCAAGGTAACTACAGAAACATTGCTTCTGGAGAGCAGTGACACAGGAAAAGCCATTGTGGATCTTATCTCTATTCTTAACATTACCAACCTTGTCATTGGAATCAAAAAGCTACCTTACACACGGCGCAATAATAAATTGAGTAAAGGAGAGTTTGTAAAGAAAAATGCACCCAAGTCCTGTGATGTTACATTGGTTTACAATGGCGAGGTGTTTGTGTCTAACCCTTACGTGGGTGACTTGGCATCACATAGTAAAGGTCACTCAAAAAACAGCTTCTTTCAGTGTATGTGCTTTTCAGGGTGCGTGAGAGAAGACAAGGATAACTACTAG 942 0.3992 MEDEYLRTPTEAKDYYSRSIWWSETAKAERNDRNGVNGIYLAAGRDYYSYNSQEIATPEVSNTYEELKGLTNTRNRIDDISEAGGEENGDYGQYSRQLLSTEIVEIVEDGKSITSNKDRGVDDLYVAVGKDDLDVVKWALDHAVSPGSRIFLVHVSPPITLIPTPVGKFERSQLTPQQVRLYVNEVNNKRKDLLQKYIHLSTEAKVTTETLLLESSDTGKAIVDLISILNITNLVIGIKKLPYTRRNNKLSKGEFVKKNAPKSCDVTLVYNGEVFVSNPYVGDLASHSKGHSKNSFFQCMCFSGCVREDKDNY. 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g01604 313 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 132 270 - -
Seca11g01604 313 Gene3D HUPs 126 266 IPR014729 -
Seca11g01604 313 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 52-LIKE 86 306 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g01604 Seca-Chr11 18191069 18194031 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g01604 119 272 U-box Gene Family AT2G45910 29.814 1.95e-12 65.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g01604 - - pvu:PHAVU_003G204300g 454.907