Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g01594 ATGATGACAAGGTCTTTTGTTGGGAAGATACAAAAGAGTCTCTCACTCTTTGTACCAACAAGGACTGCACTACACTTGAATGAAGATCAACAGGAAATTGCAACCTCAATTCCAGATGATGTTTTGGAAGGACATTTTGCTGTTCTTGTTACCAATGGTGAGGAAAGCAAAAGGTTTGTTGTTAAGTTAGATTACTTGAGTGACCCTGCATTCTTGAGACTGTTGGACCAAGCTAGGGAGGAGTTTGGTTTCAGGCAGAAGGGAGCTCTTGCAGTCCCTTGCCGGCCTCAAGAATTACAAAAGATTCTAGATGATCCAAGAGCATAG 327 0.422 MMTRSFVGKIQKSLSLFVPTRTALHLNEDQQEIATSIPDDVLEGHFAVLVTNGEESKRFVVKLDYLSDPAFLRLLDQAREEFGFRQKGALAVPCRPQELQKILDDPRA. 109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g01594 108 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 25 102 IPR003676 GO:0009733
Seca11g01594 108 Pfam Auxin responsive protein 32 103 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g01594 Seca-Chr11 18022452 18022778 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g01594 7 94 Calmodulin-binding Proteins AT4G34750 40.659 5.37e-13 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g01594 - K14488 gmx:100816234 138.272