Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g01574 ATGGAAGTCCCCAAATCCCCTTCCAAAGATAAGCGATTCGCCACCAAGCATAAATGGCTCTTTATTAAAATCGTTGCTGTCTTTTTTATCATCATGCTCTTGTTACTGGGTTTCTATCTCGAATCAGATAACGGGAAAGGTCTCACTGCACTCAATGCGTCGTCGTATTACACTGTGGTTGTTGATTGTGGAAGCACGGGAACACGGGTGAATGTGTATGAGTGGATAGTAGGGGGTTTAAGTAAAGGGAACAAGTACAACTTGCCAATTTTGCTGCATTCTTATCCTGATAATGCAACTAGGGATTCACTTTGGAAAAGTTCTTGTCAATATCACTGTATGCAAACTGAACCTGGGTTAGATAAATTGGTCAATGATTCTTTGGGAGTGAGGGAAGCTTTGGAGCCTTTGATTGTGTGGGCAGAAAATCTGGTGCCACATGAAATGCACAGTGACACTCCTATTTTTGTCCTGGCCACTGCTGGGATGAGGAGGCTCTCGAGGGATGATGCTGACTTAGTATTGAGGGATGTTGAGGCTGTTGTGAAGGATCATTCCTTTATGTTTAGCAAGAGCTGGATAAGGGTTTTGAGTGGGAGGGAAGAAGCTTATTATGGTTGGGTGGCTTTGAACTACAAAATGGGCAGTTTTGATGGTTATCCTGGCTCTCCCACTTTAGGACTTGTTGATTTGGGTGGCTCGTCGTTGCAGATTGTGGTGGAGATAGATGATGCCAGGGATGATGTGCATGTGATGAGATCAAAGCTCAGTTCAATTGAACATTGGATTGCGGCATACTCATTGCCTGCATTTGGCTTAAATGAAGCATTTGATAGGACAGTTCTTATGCTCAGAAATAATCAAAGCGTAGAAAGGACCAGTAGTGTATCTGAAATTAGACATCCTTGTCTGATGTCTACTTTTGTACAGAACTATACTTGCTATTATTGCTCTGGATTTGATGCCAATTATCAGAAAAATCATAGCCAACCCCAAAAAGCTGAACTTCATTCTTTACGTCTTATTGGAGAACCTGATTGGGAGAAATGCAAAGAACTAGCTATTGCTGCTGCTATGAACTTGAGCAATTCTAAAGTGTCACATCCAGCAGTTGGCAAAAATTGCCAAGCTAATTCATTTTCTGGGACTGGCACTGGTATACTTAATTTAACTGCTGTTGTGCATCCAATCAAGCGCTTTCATGCTTTATCTGGTTTCTTTTATGTCTACAATAAGCTAAATTTGAGCCCCAGAGCCAACTTAACAATGGTTTGGGAGTCAGGAAAGCAAATTTGTTCAAATTTATGGGCCAGCTTGAGCAGTATTTCTGACAATCCAAATTATGCTGGACAATTTTGTTTCCGGGTGGCTTATATGGCATCACTGATTGATTATGGTCTATGTCTCAGTGATGTAGAAATGGTATTTGGTCCAGGTGATGTTTCCTGGACATTAGGAGCTGCATTGGTTGAAGGGAAATTTCTATGGTTAAATAGTCCAAGCCGCAAAGCTCAAACTATCATTTCAAGTTTAAAGAATGTCAAGGTCATGTCTTCTCCAACTATTCTTTTTGCTGTACTTCTATTGCTTTTATTGATTGTTTATTGTAGTCAAATCAAGCTACCTATGCCAAGCAGGAGGCCTTCTGCTTCTGGCTCATCTTTACCATCTTATACCCATACAAGACACCGATTTAACTAA 1701 0.4092 MEVPKSPSKDKRFATKHKWLFIKIVAVFFIIMLLLLGFYLESDNGKGLTALNASSYYTVVVDCGSTGTRVNVYEWIVGGLSKGNKYNLPILLHSYPDNATRDSLWKSSCQYHCMQTEPGLDKLVNDSLGVREALEPLIVWAENLVPHEMHSDTPIFVLATAGMRRLSRDDADLVLRDVEAVVKDHSFMFSKSWIRVLSGREEAYYGWVALNYKMGSFDGYPGSPTLGLVDLGGSSLQIVVEIDDARDDVHVMRSKLSSIEHWIAAYSLPAFGLNEAFDRTVLMLRNNQSVERTSSVSEIRHPCLMSTFVQNYTCYYCSGFDANYQKNHSQPQKAELHSLRLIGEPDWEKCKELAIAAAMNLSNSKVSHPAVGKNCQANSFSGTGTGILNLTAVVHPIKRFHALSGFFYVYNKLNLSPRANLTMVWESGKQICSNLWASLSSISDNPNYAGQFCFRVAYMASLIDYGLCLSDVEMVFGPGDVSWTLGAALVEGKFLWLNSPSRKAQTIISSLKNVKVMSSPTILFAVLLLLLLIVYCSQIKLPMPSRRPSASGSSLPSYTHTRHRFN. 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g01574 566 MobiDBLite consensus disorder prediction 543 566 - -
Seca11g01574 566 MobiDBLite consensus disorder prediction 547 566 - -
Seca11g01574 566 Gene3D Exopolyphosphatase. Domain 2 199 476 - -
Seca11g01574 566 Gene3D - 47 198 - -
Seca11g01574 566 PANTHER ADENOSINE/GUANOSINE DIPHOSPHATASE 22 491 IPR000407 GO:0016787
Seca11g01574 566 Pfam GDA1/CD39 (nucleoside phosphatase) family 51 493 IPR000407 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g01574 Seca-Chr11 17779445 17782887 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g01574 24 495 Nodulin-like Gene Family AT4G19180 35.876 1.24e-91 295
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g01574 - - gmx:100775757 857.055