Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g01559 ATGCAGAGCGTGGTTTTACCTCTCTCTTTACCACCACTCTCTCTCCACAAACCTCGCACTTGTTTCTTCACTACCAATTTCTCTGCTTCCACTTCCAAATCCAACTACAATGCCTATTCCTCTTCCTTCCCATGCACACCTCTTGCTTCTTCTTCCTCTTCCAAACTCATCCCCTTGTCACTCCTCAATTCCTCCCAATCCTTCCAAATCAACGCAACCGCCAGCAGCACCGCCGACTCCTCTAGCAGCAGTTTGTTCAAAACTCTGGAGCTAGGAGTCCTGTTTTGCCTCTGGTTCACCTTCAACATCTACTTTAACATCTACAACAAACAGGTATTGAAGGTGTACCATTTGCCACTAACTGTCACTTCTTTTCAGTTTGCTGCAGGGACTCTCCTTGTGTTGTTTATGTGGGGTTTTAATCTCTATAAGAGGCCAAAAGTCAGTGGCGCCCAGCTTGTGGCAATATTTCCATTGGCTCTAGTACATACTTTGGGGAATGTTTTCACTAATATGAGTCTTGGAAAGGTGGCTGTGTCTTTCACTCATACCATAAAAGCCATGGAGCCTTTCTTTTCGGTGATCCTGTCTTCTATGTTCCTTGGAGAGGCGCCTACTACATGGGTGGTTTCTTCCCTTGTTCCTATTGTTGGTGGAGTCGTACTGGCTTCTGCTACGGAGGCTTCTTTCAATTGGGCTGGGTTTTGGAGTGCAATGGCTTCCAATTTGACAAATCAATCTCGTAATGTTCTTAGCAAAAAGCTCATGGTTAAGAAGGAGGAAGCTATGGACAACATAACCCTCTTCTCAATAATAACAGTTATGTCCTTCTTGTTATCAATACCTCTAACTATCTTCATGGAGGGTGTCAAATTTACCCCTGCTTACCTGCAATCTGCTGTGAGTATTTTAATGGCTGAAACTGATAACATTGCTGTTAGTATTGGATTAAATGTTCAACAAGTATACATAAGATCTCTTCTTGCTGCACTCTGTTTCCATGCATATCAACAAGTTTCGTACATGATACTAGAAAGAGTATCACCTGTTACCCACTCTGTGGCAAACTGTGTGAAGAGGGTCGTGGTTATAGTGAGTGCTGTCATTTTCTTCCAAACACCTGTCTCACCAATTAACGCATTCGGGACTGCTATAGCTCTTGCTGGCGTTTTCCTCTATTCTAGGGCGAAGCGAATTAAGCCAAAGACTTCCTAA 1215 0.4354 MQSVVLPLSLPPLSLHKPRTCFFTTNFSASTSKSNYNAYSSSFPCTPLASSSSSKLIPLSLLNSSQSFQINATASSTADSSSSSLFKTLELGVLFCLWFTFNIYFNIYNKQVLKVYHLPLTVTSFQFAAGTLLVLFMWGFNLYKRPKVSGAQLVAIFPLALVHTLGNVFTNMSLGKVAVSFTHTIKAMEPFFSVILSSMFLGEAPTTWVVSSLVPIVGGVVLASATEASFNWAGFWSAMASNLTNQSRNVLSKKLMVKKEEAMDNITLFSIITVMSFLLSIPLTIFMEGVKFTPAYLQSAVSILMAETDNIAVSIGLNVQQVYIRSLLAALCFHAYQQVSYMILERVSPVTHSVANCVKRVVVIVSAVIFFQTPVSPINAFGTAIALAGVFLYSRAKRIKPKTS. 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g01559 404 NCBIfam Tpt phosphate/phosphoenolpyruvate translocator 89 403 IPR004696 GO:0016020|GO:0022857|GO:0055085
Seca11g01559 404 SUPERFAMILY Multidrug resistance efflux transporter EmrE 129 224 - -
Seca11g01559 404 PANTHER SOLUTE CARRIER FAMILY 35 92 398 - -
Seca11g01559 404 SUPERFAMILY Multidrug resistance efflux transporter EmrE 322 398 - -
Seca11g01559 404 Pfam Triose-phosphate Transporter family 90 394 IPR004853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g01559 Seca-Chr11 17496183 17500419 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g01559 58 402 Antiporters AT5G33320 69.253 1.87e-166 471
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g01559 K15283 - gmx:100780925 513.457