Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g01515 ATGGGTGTAAACCCCATATGGGTACTCTTCATTGTCATGTTTTTGTTCTTTCCAATGACCTATTCAGAGGATGAAGTGGTGAAGCAGGCCCTAGTAAGATTCATGGACAAACTTGCACTAGGGAATCCACAAAGGCATACCAAGTATTGGGGTTGGAACCTTGCTTCAGACCCTTGCATTGGTAATTGGTATGGTGTGAGTTGCTTAAGGGGGAAAGTGAATAGTATAGTTCTTGATGATTCCAGCTTAAATGGGACTTTAGATGCCACTTCTCTTTGCATGGCAAACTCTCTTCAAAGCCTTAGCTTGAAGAAAAACAATTTACATGGATTGGTACCTGAGGATATAGGACTTTGCAAGTCCTTGACTCATTTGTATTTAAGTGACAACAACTTCTCTGGTGATCTTCCAACTTCTCTTGCAGAATTAGGCAATTTGAAGAGGCTTCATGTTGCAAACAACAACTTCTCTGGAGAGCTTCCTAATATGATTCATGTTTCAGGGTTGATATCTTTTCTTGCTGAAAACAACAAATTCACTGGGGAAATTCCTGATTTTAACTTCTCCATGCTTTTGGAGTTTAATGTCTCCAACAACAATTTAGAGGGTCCAATTCCTGATGTCAGAGGGGCATTCCATGTAGATAGCTTTTCTGTCAATCCCAATTTATGTGGAATACCACTTCCAAAGGCATGTCCCCCTACTCCTCCACCACATGCAGGGAAAGACAGAAAATCCTTCATTGATAGTTTGGGTACTTATTCAGGTTATGTAATTCTAGGTGTATTTGTCCTGTTTTTGTTTGCCTACATATTGGTAAGGAAATTCAAGACCAAAGAAGAAGCATTGGCCATTGAAAAGAAGGGAGTGGAAGAAGATACTAGTGATGAAAAGCCTAGAGAATTTTCCTCTGGAACTAGGAGTGGCAATGGGATGAGATCCGGGAATTCAATTGCATTGGCATCCTTTGAAAGTGGGATGAACACATCAACATCAACTCTTGTTGTTTTCTCAAGCCCAGTGTCAAAGGCATTGCAACTTGAGGACTTGCTCAAAGCTCCTGCTGAATTAATTGGGAGAGGAAAGCATGGAAGCATCTACAAGGTGATGCTAGAGAATGGGGTGCTTTTGGAAGTCAAGTGGATCAAGGATTGGAGAATTTCAAAACAAGATTTTGAGAGAAGGATGGACAATATTGGCCAAGTGAAGCATCCATATGTAGTGCCACTTGTTGCATATTATTGCTCACCACAAGAGAAGCTACTAGTATATGAATACATGGAGAATGGGAGTCTCTTCCAAATGCTATGTGGATCCCAGAGTGGCCAATCTTTTGACTGGTGGAGCAGACTTAATGTTGCTGCTAACATAGCTGAGGCTTTGGCTTATATGCATGAGGAGCTTTGTGAGAGTGGAATAGCTCACGGTAACTTAAAATCAAGTAACATTTTATTTGGCAAGGATATGTATCCATGCATAAGCGAATATGGTCTGATGGTGATTGATGATCAAGCTCAAAGTGAAATTTCTCATGGTAGAAGTCTCAAAAACAAGAGTCTGATTGCTGCTAATGCATATAGCACCTTCAAAGTTGATATATATGCCTTTGGTGTGATACTTCTTGAGCTTCTGACAGGAAAAGTAGTACAAAATAATGGATTCAATCTGGCCAAATGGGTGGATTCAGTGGTCAGAGAGGAATGGACTGTTGAAGTTTTTGACAAGGCATTAATGTCACAAGGTGCTAGTGAAGAGAGGATGATGAACTTGTTGCATGTAGCACTAAAATGCACAAATCCTTCACCAACTGATAGACCAAGCATGAGTGAAGTTGCAGCAATCATAAGTACATTGAAAGAGGAAGAAGAAAGATACACAAGCTTTGACCAATAA 1893 0.4031 MGVNPIWVLFIVMFLFFPMTYSEDEVVKQALVRFMDKLALGNPQRHTKYWGWNLASDPCIGNWYGVSCLRGKVNSIVLDDSSLNGTLDATSLCMANSLQSLSLKKNNLHGLVPEDIGLCKSLTHLYLSDNNFSGDLPTSLAELGNLKRLHVANNNFSGELPNMIHVSGLISFLAENNKFTGEIPDFNFSMLLEFNVSNNNLEGPIPDVRGAFHVDSFSVNPNLCGIPLPKACPPTPPPHAGKDRKSFIDSLGTYSGYVILGVFVLFLFAYILVRKFKTKEEALAIEKKGVEEDTSDEKPREFSSGTRSGNGMRSGNSIALASFESGMNTSTSTLVVFSSPVSKALQLEDLLKAPAELIGRGKHGSIYKVMLENGVLLEVKWIKDWRISKQDFERRMDNIGQVKHPYVVPLVAYYCSPQEKLLVYEYMENGSLFQMLCGSQSGQSFDWWSRLNVAANIAEALAYMHEELCESGIAHGNLKSSNILFGKDMYPCISEYGLMVIDDQAQSEISHGRSLKNKSLIAANAYSTFKVDIYAFGVILLELLTGKVVQNNGFNLAKWVDSVVREEWTVEVFDKALMSQGASEERMMNLLHVALKCTNPSPTDRPSMSEVAAIISTLKEEEERYTSFDQ. 631
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g01515 630 ProSiteProfiles Protein kinase domain profile. 352 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca11g01515 630 Pfam Leucine rich repeat N-terminal domain 28 68 IPR013210 -
Seca11g01515 630 MobiDBLite consensus disorder prediction 289 303 - -
Seca11g01515 630 Gene3D Ribonuclease Inhibitor 25 170 IPR032675 -
Seca11g01515 630 Gene3D Phosphorylase Kinase; domain 1 319 426 - -
Seca11g01515 630 MobiDBLite consensus disorder prediction 289 313 - -
Seca11g01515 630 Gene3D Ribonuclease Inhibitor 171 235 IPR032675 -
Seca11g01515 630 Gene3D Transferase(Phosphotransferase) domain 1 427 629 - -
Seca11g01515 630 FunFam Leucine-rich repeat receptor protein kinase EMS1 89 185 - -
Seca11g01515 630 SUPERFAMILY Protein kinase-like (PK-like) 355 613 IPR011009 -
Seca11g01515 630 Pfam Protein kinase domain 356 611 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca11g01515 630 PANTHER OS05G0588300 PROTEIN 9 620 - -
Seca11g01515 630 SUPERFAMILY L domain-like 54 223 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g01515 Seca-Chr11 16738825 16741692 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g01515 52 619 Receptor kinase-like Gene Family AT1G68400 34.477 1.18e-100 319
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Seca11g01515 Pkinase 1.6e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g01515 - - pvu:PHAVU_009G180700g 746.503