Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g01512 ATGCAGAATTGTGTATTCACCGGGATAAGCTACAGCTCTCCCACTCTTGGATCTGCTATGAGCAACTTGACTCCAGCAATCACGTTTGTCCTAGCGGTCATCTTCAGGATGGAAAATTTGGATATTGGAAGCTCAATAAGCCAGATCAAAATCGTGGGCACAGTGCTGTCGATCTCGGGAGCTTTACTCGTGACCCTTTATAAGGGTGCTCCCATTGGCAGCTTTCAAACTCAACCCTCTCCATCGCAACCAGCCCCATATCTGTTGGCAGAAACCAGTAACTGGGCTGTTGGGGGCCTCTTCCTTGTCATTGCTTCTGTATCTCTTGCTGTCTGGAATATTGCTCAGGCAGCAATTCTGAAAGGATATCCATCTCAGTTGACCATAGTAGCCTTCTATATCCTGTTTGGAACCATCCAAAGTGCAATACTTTCTCTGATTGTAGTCAGAGATCCAAATGCTTGGAATCTAAATGCTGACATTGAGCTCATCTCCATATTCTACTCAGCTGTTTTTGGAAGTGTGGTGACATATTCGGTACTGACTTGGTGCATAAATAGGAAAGGACCTGTATTTGTTACCATGTTCAAGCCTGTGGGGATTGCAATTGCTGCCTTTATGAGTGCTGTCTTTCTTGGTGATACACTCCATGTTGGAAGTGTAATTGGCGCACTAGTAATCGCCATTGGATTTTACACGGTACTGTGGGCACAATCGAAAGAAAGAAATGTGAAAGGCCTCGAAGTTGATAGACAATCATCCCCGTCTGCCCAAGCAAGTCCTCTACTAGAGTCACCATGA 801 0.4519 MQNCVFTGISYSSPTLGSAMSNLTPAITFVLAVIFRMENLDIGSSISQIKIVGTVLSISGALLVTLYKGAPIGSFQTQPSPSQPAPYLLAETSNWAVGGLFLVIASVSLAVWNIAQAAILKGYPSQLTIVAFYILFGTIQSAILSLIVVRDPNAWNLNADIELISIFYSAVFGSVVTYSVLTWCINRKGPVFVTMFKPVGIAIAAFMSAVFLGDTLHVGSVIGALVIAIGFYTVLWAQSKERNVKGLEVDRQSSPSAQASPLLESP. 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g01512 266 Pfam EamA-like transporter family 98 235 IPR000620 GO:0016020
Seca11g01512 266 SUPERFAMILY Multidrug resistance efflux transporter EmrE 164 240 - -
Seca11g01512 266 SUPERFAMILY Multidrug resistance efflux transporter EmrE 3 68 - -
Seca11g01512 266 PANTHER WAT1-RELATED PROTEIN 2 250 IPR030184 GO:0016020|GO:0022857
Seca11g01512 266 MobiDBLite consensus disorder prediction 247 266 - -
Seca11g01512 266 MobiDBLite consensus disorder prediction 249 266 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g01512 Seca-Chr11 16717801 16721258 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g01512 8 253 Nodulin-like Gene Family AT5G40240 46.586 1.87e-70 219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g01512 - - psat:127073896 416.772