Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g01505 ATGGATAACCTTAATGATATATCTGGTGTTAATTTAAATGATGATGCATATGGATATGAGCTTGTTAGTTCTGATGATAGTGCAAGTGATGAGGCGATTGATGATAGTGATAGTGATAGTGATGGTCATGGGGATTGTGATGTTGGAAATGGAAATGAGAGTGAAAATGATATTGCCACTAACCATGATGAACATAAGGGTAACAATAACAAAAACAGGGATCCCTTAATTGATGTAGATGGTGAAAAATTTAAAAGCATAGTAGATTTGACTGAAGAAGATATATTAGGACTTGATTTTGGTACTGAACAAGAAGCCTACGGATTTTATAGAACATATGGAAAATGTATAGGTTTTGCTGTAAGGAAAGATGATGTAAAGAGGGATGTTAGGGGGCAGATTAGAATGCGACAATTTGTCTGCAATAAAGAAGGCGAACGGAACAAAAAACATTTAATGAGGGTTGATAGAAAAAGAGATCACAGGTCGTTGACTCGTACTTCTTGTACTGCTAAGATTCGTGTTCACTACAATATGAAGACAAACAGATGGAAAGTGGTGTCCTTCAAGCAGTCTCATAACCATGAATTATGCCCATCAGTATATAGGCACCTCATCACTGCAAATCGCTGCATTTCGGATGCTGACAAAGCCCAAATTGATAGCTTGCATGAACATGGGGTAAGAACCTGCCACATAATGGGTTATATGGTAGCTCAAAGAGGGGGATATGGTAATTTGTGTTTTTTGAGAAAGGATGTTTATAATTATCTTGATAGCAAAAATCGTAATCGGATTAAAGGTGGAGACGCTCGTGCAGCGTTAAGTTATCTTCAAGGAAAGTCTAATAGTGACCCCATGTTATATTGCAAGTACACAATTGATGAGAAAAATAGATTAAGGTCACTATTTTGGGCAGATGGTGCTTGCGTATCAGACTACCTGTGCTTTGGTGATGTTATTGCCTTTGACACTACCTATAAGAAAAACAGATACCAGCATCCTTTGGTAATTTTCTCATGGTGTAATCATCATTCTCAAATCGTTATTTTTGGCTTTGCATTAGTGCCAGATGAGAGAATTAACACATACAAATGGGTCCTTCAAGCTTTTTCAGAAGCAATGTTCAACAAACAACCAAAATCAGTGGTTACTGATGGCGATGGAGCTATGAGAGAAGCCATTAAGCAAGTGTTTCCTAATGCATCACATAGATTGTGTGCTTGGCACTTGCAGAAAAATGCGTGTGAAAATGTTAAGAGACCACCTTTTTTGGAGGACTTTCAGAAAGCTGTGTACTCAAATTTTACCCCTCAACAATTTGAAGATTTTTGGGAGAAGATGGTTTTGAAACATGGGCTGGTAGGAAACAATTGGGTGAGTAAAACATATGAGAACAAAGCATTATGGGCCATTGCATATCTTCGAGATAAGTTTTTTGCTCGTATTAGGACTACATCTCAATGTGAGTCTATTAATGCATTTATAAAGGCATATGTAAGGAAGAAGAGCAGCTTTGTTGAATTAATGCATAATACTGATCAAGCATTGAGAGAATACAGAAACAATGAAATGATTGCAGATTATAAGTCATTGTTCACAGAACCTGTGTTAACTACATCTTTGTACAAGGTTGAGAAAGAGGCTTCCAAAATCTATACATTAGAAATTTTTAAAGAAGTAAAGCATGAGATTGAAAAGGCTGGTGCGCTAATTGTTATTGATCGAAGGATAATAGGTGATAAGTTGTTGTTCAAACTCAACCAGTATTGTAAACCTGGGAAAGAAAGAAATGTTCAGTATGATTCTGCAAATTCAATTTTTTCCTGTGATTGTAGTCTTTTTGAATCTCGTGGAATACCATGCTCACATTTTTTGTGCGATGAAAAATGA 1893 0.3645 MDNLNDISGVNLNDDAYGYELVSSDDSASDEAIDDSDSDSDGHGDCDVGNGNESENDIATNHDEHKGNNNKNRDPLIDVDGEKFKSIVDLTEEDILGLDFGTEQEAYGFYRTYGKCIGFAVRKDDVKRDVRGQIRMRQFVCNKEGERNKKHLMRVDRKRDHRSLTRTSCTAKIRVHYNMKTNRWKVVSFKQSHNHELCPSVYRHLITANRCISDADKAQIDSLHEHGVRTCHIMGYMVAQRGGYGNLCFLRKDVYNYLDSKNRNRIKGGDARAALSYLQGKSNSDPMLYCKYTIDEKNRLRSLFWADGACVSDYLCFGDVIAFDTTYKKNRYQHPLVIFSWCNHHSQIVIFGFALVPDERINTYKWVLQAFSEAMFNKQPKSVVTDGDGAMREAIKQVFPNASHRLCAWHLQKNACENVKRPPFLEDFQKAVYSNFTPQQFEDFWEKMVLKHGLVGNNWVSKTYENKALWAIAYLRDKFFARIRTTSQCESINAFIKAYVRKKSSFVELMHNTDQALREYRNNEMIADYKSLFTEPVLTTSLYKVEKEASKIYTLEIFKEVKHEIEKAGALIVIDRRIIGDKLLFKLNQYCKPGKERNVQYDSANSIFSCDCSLFESRGIPCSHFLCDEK. 631
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g01505 630 Pfam MULE transposase domain 320 414 IPR018289 -
Seca11g01505 630 MobiDBLite consensus disorder prediction 27 41 - -
Seca11g01505 630 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 90 626 IPR031052 GO:0006355
Seca11g01505 630 MobiDBLite consensus disorder prediction 57 77 - -
Seca11g01505 630 Pfam FAR1 DNA-binding domain 109 198 IPR004330 -
Seca11g01505 630 MobiDBLite consensus disorder prediction 21 77 - -
Seca11g01505 630 ProSiteProfiles Zinc finger SWIM-type profile. 595 626 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g01505 Seca-Chr11 16675011 16676903 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca11g01505 MULE 5.8e-28 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g01505 - - ccaj:109792835 766.533