Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g01489 ATGACTTTTTCACATATCCAAAAGACGAAAGAAAAAGATAAGAAAAGAAAAAACCCGTCGAAGAGCTCAATCATATTTAGCTCAGTTCTGACACCAAACTCAGCAGCTCCCACCACTATCAATCACTCCATTGAATCAAATCAATACAGAGAAAGAGAGAGAGAGATAGATATAATGGATATCCAGATCCCCAGTCGACACTTATTCATTAACGGAGACTGGAAATCTCCCGTCCTCAACAAACGGATTCCAATCATCAACCCTTCCACTCAACAGATCATCGGGGAAATCCCAGCCGCTACTAAGGAAGATGTGGACCTCGCCGTAACCGCTGCCAGAAATGCTCTCTCCCGTAACAAGGGCGCCGATTGGGCTTCCGCTTCTGGCTCTGTTCGTGCCCGCTATCTACGCGCCATCGCTGCCAAGATCACTGAGAAAAAGTCTCTGCTGGCAAAACTTGAAGCTATTGATTGTGGAAAACCACTTGATGAAGCCGCATGGGATATCGATGATGTTGCTGGTTGCTTTGAGTTCTATGCTGAGCTTGCTGAAAAATTGGATGAAAAGCAAAAAGCGCCGGTTTCTCTTCCTATGGAGACATTCAGGAGTTATGTCCTTAAGGAGCCCATTGGAGTTGTTGGATTAATAACTCCATGGAATTATCCTTTGTTGATGGCTACGTGGAAGGTTGCTCCCGCTCTGGCTGCTGGTTGTGCTGCAATATTGAAGCCATCTGAATTGGCATCTGTGACCTGTTTGGAGTTGGGTGAAATATGCAAAGAAGTGGGCCTTCCTCCCGGTGTATTGAACATTCTCTCTGGATTAGGCCCGGAGGCTGGTGCTCCTCTGGCATCCCATCCTGATGTTGACAAGATTGCCTTTACTGGAAGCTCTGCAACTGGGAGTAAAATCATGACAGCTGCAGCTCAGCTGGTCAAGCCTGTTTCGCTAGAGCTTGGTGGAAAAAGCCCAATCATTGTTTTTGAGGATGTTGACCTTGATAAGGCTGCTGAATGGACCATCTTTGGCTGCTTCTGGACAAATGGTCAGATATGCAGTGCAACTTCCCGCCTTATTGTCCATGAAAGTATAGCTACAGAATTTTTGGATAGGATTGTAAAATGGATTAAAAACATCAAAATTTCAGATCCCTTGGAAGAAGGTTGCAGGCTAGGACCTGTAGTTAGTGAAGGACAGTATGAAAAAATATTGAAGTTTATCTCGAATGCTAAGAATGAGGGTGCGACCATTTTGACTGGTGGGTCTCGCCCAGAGTTAGGTATTTCTGCAATTTCCGTGAGTATTGAATATTGTTTTCAAATTCAATGGCAGCATCTAAAGAAAGGATTCTTTATTGAACCAACTGTCATAACTGATGTGACTACGTCCATGCAAATTTGGAAAGAAGAAGTATTTGGACCTGTTCTCTGCGTAAAAACATTTAGCACTGAGGAAGAAGCTATTGATCTAGCAAATGACACTGTATATGGCTTAGGTTCTGCCGTAATATCAAATGATCTAGAAAGATGTGAGCGCATTACTAAGGCTTTTAAGGCTGGAATTGTATGGATCAATTGCTCTCAACCATGCTTCACCCAAGCCCCATGGGGAGGAGTTAAACGCAGTGGTTTCGGCCGTGAATTAGGAGAATGGGGACTTGATAATTACCTGAGTGTGAAGCAAGTGACACAGTATATCTCTGATGAACCGTGGGGATGGTACAAATCACCTTCAAAGCTGTGA 1743 0.4406 MTFSHIQKTKEKDKKRKNPSKSSIIFSSVLTPNSAAPTTINHSIESNQYREREREIDIMDIQIPSRHLFINGDWKSPVLNKRIPIINPSTQQIIGEIPAATKEDVDLAVTAARNALSRNKGADWASASGSVRARYLRAIAAKITEKKSLLAKLEAIDCGKPLDEAAWDIDDVAGCFEFYAELAEKLDEKQKAPVSLPMETFRSYVLKEPIGVVGLITPWNYPLLMATWKVAPALAAGCAAILKPSELASVTCLELGEICKEVGLPPGVLNILSGLGPEAGAPLASHPDVDKIAFTGSSATGSKIMTAAAQLVKPVSLELGGKSPIIVFEDVDLDKAAEWTIFGCFWTNGQICSATSRLIVHESIATEFLDRIVKWIKNIKISDPLEEGCRLGPVVSEGQYEKILKFISNAKNEGATILTGGSRPELGISAISVSIEYCFQIQWQHLKKGFFIEPTVITDVTTSMQIWKEEVFGPVLCVKTFSTEEEAIDLANDTVYGLGSAVISNDLERCERITKAFKAGIVWINCSQPCFTQAPWGGVKRSGFGRELGEWGLDNYLSVKQVTQYISDEPWGWYKSPSKL. 581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g01489 580 CDD ALDH_F10_BADH 85 564 - -
Seca11g01489 580 PANTHER ALDEHYDE DEHYDROGENASE 62 580 - -
Seca11g01489 580 FunFam NAD/NADP-dependent betaine aldehyde dehydrogenase 70 335 - -
Seca11g01489 580 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 325 535 IPR016163 GO:0016620
Seca11g01489 580 MobiDBLite consensus disorder prediction 1 22 - -
Seca11g01489 580 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 82 560 IPR016162 GO:0016491
Seca11g01489 580 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 317 324 IPR029510 GO:0016491
Seca11g01489 580 FunFam Betaine aldehyde dehydrogenase 321 531 - -
Seca11g01489 580 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 345 356 IPR016160 GO:0016491
Seca11g01489 580 Pfam Aldehyde dehydrogenase family 81 562 IPR015590 GO:0016491
Seca11g01489 580 SUPERFAMILY ALDH-like 42 563 IPR016161 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g01489 Seca-Chr11 16414286 16420112 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g01489 59 578 Aldehyde Dehydrogenase Gene Family AT1G74920 78.077 0.0 857
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g01489 K00130 - gmx:100170731 938.332