Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g01485 ATGACGGATTATTCTATGCCGGGGATGACAGGATATGAACTACTCAAGAAAATCAAGCAGGAGTCTTCTGTTTTTAGAGAGATTCCGGTGGTGATCATGTCGTCGGAGAATATCTTGACTCGAATTGATAGGTGCCTGGAGGAAGGAGCAGAGGATTTTTTGTTGAAGCCGGTCAAGTTGTCAGATGTAAGACGCTTAAAAGATTTCATCATGAGAGGTGAAGTGAAGGAAGGGGAGAGAACATCTAACAAAAGAAGGAGATCAGATGATTGCAGCCAATCTCTATCAACTACATTCTCACCAATGTCTCATCCATGTGATCCATGTTCATCAGTACTCTCAGTCTCACCACTATCACCATCCACTTTACCCTCAAAAAAGTCTAGATTGTGA 393 0.4224 MTDYSMPGMTGYELLKKIKQESSVFREIPVVIMSSENILTRIDRCLEEGAEDFLLKPVKLSDVRRLKDFIMRGEVKEGERTSNKRRRSDDCSQSLSTTFSPMSHPCDPCSSVLSVSPLSPSTLPSKKSRL. 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g01485 130 MobiDBLite consensus disorder prediction 74 130 - -
Seca11g01485 130 MobiDBLite consensus disorder prediction 74 91 - -
Seca11g01485 130 PANTHER TWO-COMPONENT RESPONSE REGULATOR 1 84 IPR045279 GO:0009736
Seca11g01485 130 MobiDBLite consensus disorder prediction 92 130 - -
Seca11g01485 130 Gene3D - 1 104 - -
Seca11g01485 130 ProSiteProfiles Response regulatory domain profile. 1 71 IPR001789 GO:0000160
Seca11g01485 130 SUPERFAMILY CheY-like 2 72 IPR011006 -
Seca11g01485 130 Pfam Response regulator receiver domain 2 64 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g01485 Seca-Chr11 16381051 16383627 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g01485 1 85 Response Regulator Gene Family AT3G48100 77.647 6.52e-41 132
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Seca11g01485 Response_reg 2.1e-13 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g01485 K14492 - gmx:100527518 189.889