Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g01456 ATGACCCTAAAGGGTGGTACAACCCAGGCTTGTGCTGCATGCAAATTCCAGAGAAGAAAGTGCACTCCTGAGTGTGTTCTAGCCCCATATTTCCCTGCTGACCAACCCAATGTATTTAAAAATGTCCACAAGCTGTTTGGAGTTAGCAACATCGTAAAGATATTAAAGATCTTGGAGCCTAGTCAGAAGAAGATAGCTATGGATTCTATTATTATTCAAGCAAATTACAGGGACAAGTACCCTGTTCATGGTTGTTGGGAGGAAATCTGCAGGCTACAATACCAAATATGGGTGATGGAAGAAGAGCTTCATGCAGTTTATCAACAGCTTGAAATGTGTAGGCAACAGCAACACAATCAGCAGCAGCATCAAGGTCCTTCCTTGCCTGTGCCTGATGATGTGACTTCACAATTAGAATTGGGAATGGCACCACGTTCTAATGCCCTCCCACTCTTTAATCATACCCCACAACAACCACAGACTTACAACACAGCAGCTGCTTTGTCTGTGTCACAACAACATTCCTACTCCAACAGCAACAGTGTGGATTATAACTCCCTGTACTTGGATTCCAAGGATAATGCCACAAATCCTTTGTGGGTTCAGTACCCCTATGCAAATAACAATAGCAATTCAATAGCATTGCAAACTCAGTTGGTTGCTTCACAGCCACTAGGCATCCAACAAGAAGTTGTTGAAGATTATGATGAGATGCATCCATTTTTTGATACAGTTGATGATAGGCAATCATACATTTATTCAAAGGAGGCTTATGAATCAAGTTCAGAAGAATCACTAAAAGATACGAGAAAGTGCACTGAGCATGTTTCTGAGAATGAACTGAAGAGTGCTGCTGCATGCTTCAGCCTTACCAGTGTCAACTGA 885 0.4203 MTLKGGTTQACAACKFQRRKCTPECVLAPYFPADQPNVFKNVHKLFGVSNIVKILKILEPSQKKIAMDSIIIQANYRDKYPVHGCWEEICRLQYQIWVMEEELHAVYQQLEMCRQQQHNQQQHQGPSLPVPDDVTSQLELGMAPRSNALPLFNHTPQQPQTYNTAAALSVSQQHSYSNSNSVDYNSLYLDSKDNATNPLWVQYPYANNNSNSIALQTQLVASQPLGIQQEVVEDYDEMHPFFDTVDDRQSYIYSKEAYESSSEESLKDTRKCTEHVSENELKSAAACFSLTSVN. 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g01456 294 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 8 155 - -
Seca11g01456 294 ProSiteProfiles LOB domain profile. 9 110 IPR004883 -
Seca11g01456 294 Pfam Lateral organ boundaries (LOB) domain 10 106 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g01456 Seca-Chr11 15998973 16000620 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g01456 1 257 AS2 family AT3G47870 39.550 7.46e-56 181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Seca11g01456 LOB 2.8e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g01456 - - lang:109357116 417.927