Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g01455 ATGAGCTTAGATGGAAATCATGATGCTGACTGGATGCCTAAATGGGTATTGAACTATGACTCTGGTGTGCAGGAATGGACTACTCCCCCTCCTTATATCTCTGTTTGCTACTATGGTCAGCATTATCATTGCTTTGCTTATAGCCATGACCATGAACAATGGATTATGTATGATGACAAGACTGTCAAGATAATTGGTGGTTGGGCGGATGTTCTGACAATGTGTGAAAGAGGGCATCTACAACCTCAGGTTCTTTTCTTTGAAGCTGTAAACTAG 276 0.4167 MSLDGNHDADWMPKWVLNYDSGVQEWTTPPPYISVCYYGQHYHCFAYSHDHEQWIMYDDKTVKIIGGWADVLTMCERGHLQPQVLFFEAVN. 92
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g01455 91 SUPERFAMILY Cysteine proteinases 41 90 IPR038765 -
Seca11g01455 91 Gene3D Cysteine proteinases 32 90 - -
Seca11g01455 91 PANTHER UBIQUITIN SPECIFIC PROTEINASE 35 90 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g01455 Seca-Chr11 15991005 15991719 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g01455 35 88 C2H2 Transcription Factor Family AT3G47890 79.630 1.35e-32 116
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g01455 - - lja:Lj4g3v1601430.2 132.88